Taeniopygia guttata (zebra finch): 100232127
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Entry
100232127 CDS
T01082
Symbol
NUP214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100232127 (NUP214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100232127 (NUP214)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100232127 (NUP214)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR5
DUF8742
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
100232127
NCBI-ProteinID:
XP_012433785
Ensembl:
ENSTGUG00000004822
LinkDB
All DBs
Position
17:6657862..6696539
Genome browser
AA seq
2086 aa
AA seq
DB search
MGDDMDVVPEREMKDFQFRALKKVRIFDAPDDLPKERSSLLAVSNKYGLVFAGGGSSLQI
FHTRDLLMQKQQGEDPNKIVENIQSTLIPMKFPMQHLALSCDNLTLSVCMMSSEIGSFIS
FFDVRTFLNQAKQQKHAFACHKLAKDSGSAAVVNDLKWSPASPSMVAICLSDGSISVLQV
TDSVKVYATLPSSAAVTSVCWSPKGKQLAAGRQNGTVVQYLPNLQEKKVIPCPPFYDSDN
PVKVLDVLWIGTYVFAIVYAEADGTLEMSPQVVIAILPKKEEKRPEKFVNFMEPCYTSCT
ERQHHYFLNFVEEWDLVLAASAASTEVSILARQGDQNWESWVLEDSSRAELPLTDKSDDT
LPVGVAVDYTSNMPIVISDEKILPPAPVLILLSTDGVLCPFHMINQNPGVRSLIVTAEPL
QLVGERVTKSAGSTATSPTTPPTSLKPDTAPAAAPTVPTSSQTPAGSGAAVFSFMPSAVK
TPGSTGSDPPPYSFATDTSKQAQTPALTGAATFSFSSASSKASMTPASVGSTTTAPATSF
PFGSMNFKPAADSSPGPLLSTATAAQKPSFTPSASSVKVNLNEKFSAVDTSSPSSSSGQC
TSTMFSFSTSSKTAPGGSLSQSTPLAAPPATPLKTSSPVPTTVARPAQNTPPASLVQKTP
KITPSAAKPSTTQGKSALPSTALEKQTHQWKESDPVIAGIREEIAHFQKEMEELKARTSK
ACFQVGTPEEMKMLRTESDDLHTFLLEIKETTESLHGDISILKTTLLEGFAGVEEAKEQN
EQNRSSGYLHLLYKKPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDWHLEQKRKQ
KRLIVPERETLFNTLANNREIINQQRKRLNHLVNSLQQLRLYNQTSQWSVPSDAPLNSAQ
SFDSDLESLRNDLMKTTLKSHAKPLPKAPAKLSPVKQAQLRNFLAKRKTPPIRSTAPASL
SRSAFLSTRYYEDLDEVSSTSSVSQSLENDDSQAVDQEEEAAPVQVPRHAPVVRTPSIQP
GLMAQSPSFGKQHLSLGTLLPTSSNRIIPQGADSTMLATKTVKHGAPAPSVTVPAPQAAA
AAALQRQMAANQSPAVSTSLTESTLKTVPQVVNVREIKSSALTPAVSAVIGSSVPHSAAQ
AVHQVLATVATNQAKQTPLTSSMKSQTPPSSVCAPSPMASTAAPTSSGNKISGQGTVKTV
TAVSSTVTSVQATTSQLNKTSLFSSAGSVFNFGGVTSAASSQTLPSLTSSQAPAKESGQP
DSFLFAGSSKLGAIPEPSFVFGSHKSASAPGGVAGGSSSADGTQSNKAAATSSSAPSTTS
GKLDITPSKPGDHLFQGNLAGETLGSFSGLRVGQVDDNAKTTSKAPSTSVAGTPSTKVST
IPSGFNFSAPLTLGKAGEAASTSVTSAGTASLSSSTSATGSLFGNVQLTSTGSSGVFNLG
SSGGSKPTFSFGIQQTNSMNTSASAPSTLPASTSLSFGGFSSSSQTAVPATTSSKSAGDA
KLPPGSEKTSENEAVAPGSSPPVPQPQAQLSEPLKEPALPQATAGDTVPEGSGTTVAPPP
PDTVAAPTSTSDLKAPVPPAVSTVAPPDQNVSATTFTASVASPAEATGALAATSDVPTGV
QSPAAVASVFAPTSAGSSVFSQPPSSSSSGSAFTQPAGEAAAAPSTPPVFGQLPAGTTAS
SPFGQLTTSTLSTATATTQAATSAFGTSAFGTTTTGGFGQPAFGPAPVFGQPASSSASGF
TFSQSGFGTMPAFGQPAASTAASSSGNVFGSPASTNSPSSFSFGQPASTGGVLFGQSSPP
VFGQSTGFGQGGSVFGSTAAVTTTTSSAGFSFCQASGFGSSNTGSVFGQAANTGGTVFGQ
QPSSSTGGLFGTGSGGRGGGFFSGLGGKPSQDAANKNPFSSSSGGFGSTSSQNSSSLFGN
SGAKTFGFGSSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKAGGFGAAPVFGSPPTFGGS
PGFGGVPAFGSAPTFSSPLGSTGGKVFGEGTAAASAGGFGFGGTSNNTASFGTLANQNTP
TFGSLSQQGTGFGAQSSGFSAFGTGGGGFGFGSPNTSSSGFSGWRS
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgacatggacgtggtccccgagcgggagatgaaggattttcagttcagagca
ctgaagaaggttcgcatctttgatgctcctgatgatcttcccaaagagcgctccagcctc
ctcgcagtgtccaacaaatatgggctggtctttgctggtggagggagcagcctgcagatt
ttccacaccagagatcttctcatgcagaaacagcagggagaagatcccaataaaattgtg
gagaatattcagagtactctgattcccatgaagtttcctatgcagcacctggctctcagc
tgtgacaacctcaccttgtctgtctgtatgatgtccagtgagatcgggtccttcatcagc
ttttttgacgtccgcacgttcctaaatcaggccaaacagcagaaacatgcatttgcttgt
cacaaactggccaaggactcgggaagtgcagctgtggtcaacgacctgaagtggagccct
gccagtcccagcatggtggccatctgcctgtccgatggcagcatctctgtcctgcaggtc
acagactctgtgaaggtctatgccacactcccatcctctgctgctgtcacatctgtgtgt
tggagcccaaagggaaaacaactggctgcagggaggcaaaatggcaccgtggtgcaatat
ctgcctaatctccaggagaagaaagtaatcccttgtcctcccttttatgactcagacaat
cctgttaaagttttggatgtactttggattggcacgtatgtctttgccatcgtgtacgca
gaggctgatgggacactggagatgtctccacaagtggtcatagccatattgcctaaaaag
gaagagaagcgaccagagaagtttgtgaatttcatggagccgtgctacacgagctgcact
gagagacagcatcattacttcctcaattttgttgaggaatgggatctagttctggcagct
tcagcagcttccacagaagtcagcattcttgccaggcagggggatcagaactgggaatcg
tgggttttggaggactccagcagagcagaacttcctctgacagataaaagcgatgacact
ctgcccgttggggttgctgtggactacaccagtaacatgcccattgtgatcagtgatgag
aagatccttcctccagctccagttctgatcctgctctctacggatggtgtgctttgccca
tttcacatgatcaaccaaaacccaggagtcaggtcacttattgtgaccgcagagccgctg
cagttggtcggggagagagttacaaagtcagcagggagtactgccacaagtccaaccact
cctccaacttctctaaagcctgacacagcaccagctgccgctcccactgtgcccacctca
agtcagactccagcaggaagtggagcagctgttttttccttcatgccctcagctgtgaag
actcctggctccacaggcagtgatcctccaccatattcctttgccactgatacctccaag
caagcccagactcctgctctgactggagcagcaacattctccttctcctctgcttcttcc
aaggcatccatgactcctgcttctgtaggcagcactacaacagctcctgccacctctttt
ccttttgggtccatgaacttcaaaccagctgcagacagttcacctgggccactgctctcc
acagcaactgctgcacagaagccatcttttacaccttcagcttcttcagtcaaagtgaac
ctcaatgagaagttcagtgctgtagacacctcttctcccagcagcagcagtgggcaatgc
acttccacaatgttttccttctcaaccagttcaaaaactgctcctggaggttctttgagc
cagtccacaccccttgcagcccctcctgccacaccactgaagacttcatcccctgtccct
accacagtggcacgccctgctcaaaatactcctccagcttccttggtacagaagacaccc
aaaatcaccccatcagcagcaaagccaagcactactcagggcaaatcagcactccccagc
acagctttagagaaacagacccaccagtggaaggagtcagaccctgtcattgcaggaatc
agggaggagattgcacattttcaaaaggagatggaggagctgaaggcccggacttccaaa
gcctgtttccaggttggaactccagaggaaatgaagatgttgcgaactgagtcagatgat
cttcacacctttctcttggaaattaaagagacaacagagtcacttcatggagatatcagt
attctgaagacaaccctgctggagggatttgcaggggtagaagaggctaaagaacagaac
gaacagaatcgtagctcagggtatttacacttgctctataagaaacctttggatcccaag
agtgaagcacagcttcaggaaatccggcgcttgcaccagtacgtgaagtttgctgttcag
gatgtgaacgacgttctggatttagagtgggactggcacctggaacagaagagaaagcag
aagcgtctgatagtccctgagcgagagactttgttcaacaccctggcaaataaccgggaa
atcatcaaccagcagaggaagagactcaaccacctggtgaacagcctgcagcaactgcgc
ctctacaaccagacatctcagtggagtgttcccagtgatgcacctctaaacagtgctcag
agttttgacagtgaccttgaaagcctgcgcaacgatttgatgaaaactactttgaaatca
catgccaaacctttgcccaaagcacctgctaagctatccccagtgaagcaggcacagttg
aggaattttctagccaaaaggaaaactccaccaattagatctacagctccagcaagtttg
tcccgatctgcctttttgtccacaagatattatgaagatttggatgaagtcagctcaaca
tcctcagtttcccagtcactggagaatgatgattcccaagcagtggaccaggaagaagag
gctgccccagtccaagtccctcgtcatgctcctgtggtccgaactccctcaatccagcct
ggtttgatggctcagtctccatcctttgggaagcagcacctctccctgggtactttgttg
cctacatcttcaaacagaatcatcccacaaggggcagacagtacaatgcttgcaacaaag
actgtgaaacatggagcccctgctccctctgtcaccgttccagcaccacaagcagctgct
gctgcagctctgcagaggcagatggctgctaaccagtccccagctgtgagcacctccttg
actgaatcaactctgaagactgttcctcaggtggtgaatgttcgagaaatcaagtctagt
gcactgaccccagcagtctctgcagtaataggatcatctgtacctcactctgcagcccag
gcagtccatcaagttttggcaactgttgctacaaatcaagctaaacagacacctctgaca
agctcaatgaagagccagactccaccttcctctgtgtgtgcaccctctcctatggcatcc
acagctgctccaacatcatctggcaacaagatctcaggacaagggacagtaaaaacagtt
acagctgtttcttctactgtgacatcagtgcaagcaacaacttcacagcttaacaaaaca
tccttgttttcttctgcagggtctgtatttaattttggtggtgtcacatcagctgcttca
tcacagacgctgcccagcctcacttcctcacaagcccctgcaaaagaatcgggccagccg
gattcatttttgtttgctgggagttccaaacttggagcaatccccgagccctcctttgta
tttgggtcccacaaatcagcaagtgctccaggaggtgtagcaggaggtagctcctcagca
gatggcacccagtcaaacaaagctgctgcaacatcatcttctgctccttccacaacatct
ggcaagttggatattactccatccaaaccaggagatcacttgtttcagggcaacctggct
ggggaaactcttgggagcttctcaggactacgagttggtcaagtagatgataatgccaag
accaccagtaaagcaccatctaccagtgttgcaggaacaccgtcaactaaagtgtctaca
ataccttctgggtttaatttttctgctcccctgactttaggaaaagctggagaagctgct
tcaacatcagtcacgtcagctggcacagcatccctgtccagcagcactagtgccacaggc
agtctctttggcaatgtccagttaaccagcacagggtcttctggggtgtttaatcttgga
agctctggtggcagcaaacccaccttttcatttggtattcagcaaacaaacagtatgaac
acttctgcctctgccccttctactctccctgcttcgacatccctctcctttggaggtttc
tcaagttcgtcacaaactgctgtccctgctacaacttccagtaagtctgcaggggatgcc
aaattaccacctgggtcagaaaaaacatctgaaaacgaagctgtagcacctgggtcttca
cctccagtgccacagccccaggcacagctctcagagccacttaaagaaccagctttaccc
caggccacagctggggacactgtcccagagggctctgggaccacagtggcaccacctccc
cctgacaccgtggctgctcccacctccaccagcgatctgaaggccccggtgcctcccgct
gtctccacagtcgccccaccagatcagaatgtctcagcaacaaccttcacagcaagtgtt
gcctctcctgcagaagccacaggtgctctggctgctacctctgatgttcctacaggtgtg
cagagtccagctgctgttgcctctgtgtttgcccccacttctgcaggctcctcggtgttc
tctcagccgccgagctccagctcttctggctcggcgtttacccagcctgccggggaggca
gctgctgctccttccacaccgcccgtttttgggcagctcccagcaggtaccacagcatcc
tctccctttgggcagctcaccaccagcactctgtccacggccacagccaccacccaggct
gccacctcagcctttggtacttctgcttttggcaccaccaccacggggggctttggccag
ccagcctttgggccagcaccagtctttggacaacctgcaagcagttctgcaagtggcttt
accttcagccagtctgggtttgggacaatgccagcctttggccagccagcagcttctaca
gcagcctcgagcagtgggaatgtttttggatccccggccagcaccaacagccccagctcc
ttctcctttggccagccagccagcacgggcggggtgctctttgggcagagcagccctccc
gtgtttgggcagagcactggctttgggcaagggggatctgtgtttggtagcactgctgct
gtcaccaccaccacgtcctctgctgggttcagcttctgccaggcctcaggttttggttct
agtaacacaggttctgtgtttgggcaagcagcgaatactggaggcactgtctttggccag
cagccatcttcctccactggaggcttgtttggaactggaagtggtgggagaggtggaggc
ttcttcagtggtttgggaggaaagccaagccaggatgcagccaataagaatcccttcagt
tcctccagtggaggatttggatccacatcttctcagaattcttcaagcttatttggaaac
agcggagcaaagacttttggctttggcagctcctcctttggagagcagaagcctacgggc
actttcagctctggtggtggaagtgtggcctcccaaggctttgggttctccagtccaaac
aaagcaggtggcttcggtgctgctccagtgtttggcagccctcccactttcgggggatcc
cctgggtttggaggggtgccagcattcggttcagccccaaccttttcaagccctctgggc
tcaacgggaggcaaagtgttcggcgaggggacggcagcagccagcgctggaggatttggg
tttggtggtaccagtaacaacacagcatcatttggcaccttggcaaaccagaacacaccc
acgtttggctccctgtcccaacagggcacaggctttggagcacaaagcagtggattctca
gcttttgggacaggtggaggagggtttggttttggatcacctaacacatcttcctctgga
tttagtggatggagaagctag
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integrated database retrieval system
