Taeniopygia guttata (zebra finch): 100232206
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Entry
100232206 CDS
T01082
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
tgu
Taeniopygia guttata (zebra finch)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
100232206
NCBI-ProteinID:
XP_030137322
Ensembl:
ENSTGUG00000007065
UniProt:
H0Z9R4
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Position
10:9393959..9575937
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AA seq
1088 aa
AA seq
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MRLPVLCALVTLLSLSRCRAVSFPEDEDPINVVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYITGRDQVYTVNLNEVPKSEVIPSKKLTWRSKQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYQLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNTLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIEINGVPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPSVTEEPWFTKTRVRYR
LTAIAVDHAAGPYQNYTVIFVGSEAGVVLKILAKTRPFSLNDSILLEEIEAYNHAKCNAE
SEEDRRVISLQLDRDHHALFVAFSSCVVRIPLSRCERHGSCKKACIASRDPYCGWLDHEA
CGRVTPGMLFSLFVSYNHSTGGYIQDVEYGNTAQLGDCHEILPTTATPDYKIFGDPTSDM
EFSSASITTMASIPVISPKVIGSWKPKVTGSRKFVVQDDPNTSDYSDPLSGVPKGVRWEV
QSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDIFVRKSRKIHKDAESAQSCTDS
SGSFAKLNGLFDSPVKEYQQNIDSPKLYTNLLTSRKELPPNGDTKSMMMDHRGQPPELAA
LPTPESTPVLQQKTLQAMKSQSDKTHGNLNASRKETPLKSPQFFPSSPPPHSPLSHGHIP
SAIVLPNATHDYNTSFSNSNAHKADKKMQHIDHPLTKSSSKRDHRRSVDSRNTLNDFLKH
LNETTNNPKAIMGDIQVAHQTLMLDPMGNMSEIPPKVPNREASLYSPPSTLPRNSPTKRV
DVPTTPAVPMTSLERQRGYHKNSSQRHSISALPKNLNSPNGVLLSRQPSINRGGYMAPTA
GTKMDYMQGTPVTVHLQPSLSRQSSYTSNGTLPRTGIKRTPSLKPDVPPKPSFVPQTTSV
RPLNKYSY
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcccggtgctctgtgccttggtgacgctgctgagcctgtcccgctgccgggcc
gtcagcttccccgaagacgaggaccccattaacgtcgtggactaccactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgaatctcagcacagactggacttccaa
ctaatgttgaaaattcgagacacactctatatcactggcagggaccaggtttacactgta
aatttaaatgaggttccgaaatcagaagttatcccaagcaagaaattaacatggagatca
aagcagcaggacagagagaactgtgctatgaaaggcaaacataaagatgaatgtcataac
ttcattaaagtctttgttccaagaaatgatgagatggtgtttgtctgtggaacaaatgca
tttaaccctatgtgcagatactatcagttgaatacattagagtatgatggggaggaaatt
agtggtttggcaagatgcccatttgatgccagacaaaccaatgtcgccctctttgctgat
ggaaaattgtattcggcaacagtagcagatttcctggcaagtgatgctgttatttatcgc
agcatgggggatggatctgccttaagaacaataaagtatgactccaaatggataaaagaa
ccacacttcctccatgccatagaatatgggaactatgtttatttcttcttcagagaaatt
gctgtagagcacaacactttaggcaaggctgtgtattcccgcgtggcacgcatctgcaaa
aatgacatggggggctcccaaagggtcctggagaagcactggacatcctttctgaaagct
cggctcaattgctcagttcctggggattcattcttctactttgatgttctgcagtctatc
acagacataatagaaatcaatggagtgcccactgttgtgggggtattcaccacacagctc
aacagcatccctggttcagcagtgtgtgcttttagcatggatgacattgagaaagtcttc
aaagggagatttaaagaacaaaagactcctgactctgtttggacagctgtacctgaagac
aaagtaccaaagccaagacctggctgctgtgcaaaacatggcctagcagaggcttacaaa
acctccattgatttcccagacgaaacgctctccttcatcaaatctcatccattgatggac
tcagctgttccctcagtcactgaggagccctggtttaccaaaacacgtgtcagatacaga
ttgacagcaattgctgtagaccatgctgctggaccctaccagaactacacagtcatattt
gttggctctgaagcaggagtagtacttaaaatcttggcaaagaccaggcctttttctttg
aatgacagcatattactggaagagattgaagcatataatcatgcaaagtgtaatgcagaa
agcgaggaggacagaagagtcatttccctccagctggacagagaccaccatgctctgttc
gtggcattctccagctgcgtcgttagaattcccctgagtcggtgtgagcgtcacgggtca
tgtaaaaaggcatgtattgcttcacgggacccttactgtggctggttagaccatgaagca
tgtggaagagtgacaccaggcatgctgttctctttgtttgtttcatacaaccacagcact
ggaggatatatacaagatgtcgaatacggcaacacggcgcagcttggggactgccatgaa
attttgcctactacagctacaccagattacaaaatatttggcgacccaacatctgacatg
gagttctcctcagcttccattaccacaatggcaagtatcccagttatatcacctaaagtg
attggttcctggaaacctaaagtgactggctctcggaaatttgtagttcaagatgaccca
aacacttctgattattctgatccattatcaggtgtcccaaagggtgtgaggtgggaagta
caatcaggagagtccaaccaaatggtacatatgaatgtcctaatcacttgtgtctttgcc
gcttttgtcctgggagcctttattgcgggagtggccgtttactgctaccgggatatattt
gtgcggaaatccaggaaaatacacaaagatgcagaatcagctcagtcctgcactgactcc
agcgggagctttgccaaactgaatgggctgtttgacagtcctgtcaaggagtatcagcag
aacattgattcacccaaactgtacacaaacctgttgaccagcagaaaggagttgcctcca
aatggtgataccaagtccatgatgatggaccataggggacagcctccagaattagctgca
cttccaactccagaatctactccagttcttcaacaaaagactctgcaggctatgaaaagt
cagtcggacaaaacgcatggtaacctcaatgcttcgcggaaggaaaccccactaaaaagc
cctcagttttttccttctagtcctccaccccactctcctctaagtcatggacatattccc
agtgctattgttcttcccaatgctacccatgactacaatacgtctttctcaaattctaat
gcgcacaaggcagacaaaaagatgcaacatattgatcatccacttacaaaatcatccagc
aaaagagaccacaggagatctgttgattccaggaacactctgaatgattttctgaaacac
ttaaatgaaactactaataatcctaaagcgattatgggagatattcaagtggcccaccag
actttaatgctggatccaatgggcaatatgtctgagatcccacctaaggttcccaacagg
gaggcatctttatattctcctccatcgactctgccaagaaacagtcccacaaaacgagtg
gatgttcccaccactcctgcagtaccaatgacctctttggaaaggcagaggggttatcac
aaaaattcttcacagaggcactcaatatctgcccttcctaaaaacttgaactcaccaaat
ggtgttttgttatccagacagccaagtattaatcgtggggggtacatggctcccacggca
ggcactaagatggactacatgcaagggacgcctgtcaccgttcacctccagccttccttg
tccaggcaaagcagctacacgagcaacggcaccctgcctcgcacaggaataaagaggaca
ccctccctaaaacccgacgtgccaccaaaaccctcattcgtccctcagacaacgtcagtc
agaccactgaacaaatacagctactag
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