Taeniopygia guttata (zebra finch): 100232227
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Entry
100232227 CDS
T01082
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
100232227 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
100232227 (LRFN5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
DUF240
LSR
Motif
Other DBs
NCBI-GeneID:
100232227
NCBI-ProteinID:
XP_030131189
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All DBs
Position
5:complement(61675435..61715231)
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AA seq
772 aa
AA seq
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MEKLLLFLLFIGVAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVLALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDHIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPTLLSGRYFWSIPEEEFLCEPPLITRHTHELRVLE
GQRAALRCKARGDPEPAIHWISPEGKLISNATRSTVYDNGTLDILITTVKDTGSFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSSNGDTKVSQDK
KVVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKTFLVNNLAAG
TMYDLCVLAIYDDGITSLTATRVVGCTQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNNNGQQKATKVSNVYSQTNGAQIQGCSGVLSQSMSKQALGHEEG
IQCCKAASDGVTQSPDTGSSQDSATTTSALPPAWTSSAPLSQKQKRKSGPKPGGEAQGEA
GGSGEPQNSNRNNSTALQLASRAPEAAPAAHAYKRAQSKPSKFLTLPADAARAKRRRSLG
GELLEPRGAGAGGLRSKRSMSMNGMLLQADCAGADSGKATFSSSEWILESTV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttttgtttctgctgttcattggcgtagcggtgcgagctcagatctgc
cccaagcgctgcgtctgtcagatcctgtctccgaacctcgccaccctctgtgccaagaaa
gggctcttgtttgttcctcccaacattgacaggaggaccgtggagctgcggctggcagac
aactttgttacgaacattaaaaggaaagactttgccaacatgaccagcctggtggacctg
acgctgtcccggaatacaatcagttttatcacacctcacgcatttgccgacctgcgcaac
ttgcgggctctgcatttgaacagcaaccgattgactaagatcactaatgacatgttcagt
gggctctccaatcttcaccacttgatactgaacaacaatcagctgactttaatttcttcc
acagctttcgatgatgttttagctctcgaggaattggatttgtcttacaacaatctggaa
accatcccttgggatgccgtggagaaaatggtcagtttgcacactcttagtcttgaccac
aacatgattgaccatattcctaaggggaccttctcccacctccacaagatgaccaggctg
gacgtcacatccaacaaactgcagaagctgccacctgatccgctcttccagcgcgctcag
gtgctggcaacctcaggaattatcagcccctcaacatttgcgctgagctttggtgggaac
cccttgcattgcaactgtgagcttttgtggctgaggcgcctttccagggaggatgacctg
gagacttgtgcctctccgacgctgctgtctggccggtacttctggtcgatccccgaggag
gagttcctctgcgagcccccgctcatcacccggcacacccacgagctgcgggtgctggag
gggcagcgggcagccctgcgctgcaaggcccggggcgaccccgagccagcaatccactgg
atttcacctgagggcaaactgatctccaatgcgaccaggtccacggtgtacgacaacggg
acgctcgacatccttatcacaacagtgaaggacacgggctccttcacctgcattgcttcc
aacccagcgggggaggccacgcagacggtggacctgcacatcatcaaactcccccacttg
ctgaacagcacaaaccacatccacgagcctgacccgggctcctcggatatctccacatcc
accaagtcgggctctaacgcgagcagtagcaacggggatactaaagtcagccaggataag
aaggtggtcgtcgcagaagcgacgtcctccacggctctgctgaaattcaattttcagagg
aatatacctgggatacgtatgtttcaaatccagtacaatggtacttacgatgactccctt
gtttacagaatgatacctcccacgagcaaaacctttctggtcaacaacctggctgcgggg
acgatgtacgacctgtgcgtcctggccatctacgatgacgggatcacctcgctgacggcc
accagagtcgtgggctgcacgcagttcaccaccgagcaggattacgtgcgctgccacttc
atgcagtcccagttcctgggtgggaccatgattatcatcattggtgggatcattgtggcg
tccgtgctcgtgttcatcatcatcctcatgattcgctacaaggtgtgtaacaacaacggg
cagcagaaggccaccaaggtcagcaacgtgtactcgcagacgaacggggcgcagatccag
ggctgcagcggggtgctgtcgcagtccatgtccaagcaggcgctcgggcacgaggagggc
atccagtgctgcaaggctgccagcgacggtgtgacgcagtcaccggacaccggctccagc
caggactcagccaccactacctccgctttgcctcccgcctggacttccagcgctccgctc
tcgcagaagcagaagcgaaagtcggggccaaagccgggcggcgaggcgcagggcgaggct
ggcggcagcggcgagccccagaactcgaacagaaataactccacggccctgcagctggcc
agccgggcccctgaggcggcccctgcagcccacgcgtacaaaagagcacaatcgaagcca
agtaagttcctcactctgccggccgacgcggcccgagccaagcgccggcgctcgctgggc
ggtgagctgctggagccccgcggcgccggcgccggcggcctgcgctccaagcgcagcatg
tccatgaacgggatgctgctccaggctgactgcgccggggccgatagcggaaaagcaact
ttctccagttctgagtggatattggaaagcactgtgtga
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