Taeniopygia guttata (zebra finch): 100232468
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Entry
100232468 CDS
T01082
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
100232468 (RRP12)
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
90S particles
Other 90S particles
100232468 (RRP12)
Pre-60S particles
Other pre-60S particles
100232468 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
100232468
NCBI-ProteinID:
XP_030132100
Ensembl:
ENSTGUG00000009711
LinkDB
All DBs
Position
6:21094429..21107199
Genome browser
AA seq
1318 aa
AA seq
DB search
MAAGAGSGKGALGAATRGAGPSMARSGRLRSGAAAKLKRWRKGHSSDSNPETRQHRLAAR
SRFCSRPAGEKSNLTVDAVKLHNELQSGSLRVERASDSAQLRMEEDGAEEAATEKSSGTF
LSGLSDCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSRGGKESETEYFAALMTTL
EAVESPESLSAVAYLLNLVLKRVPSPVLIKKFSDASKAFMSIVSSQACSSSTSALRWVLS
CLATLLRKQDLAAWSYPVTLQVYHGLLSFCVHTKPKVRKAAQYGVCSVLRGSEFMFGDAA
PEHHPAAPSTAKFCVQEIEKAGGAKEATTTLHVLALLRDVLPCFPAAVVKTCCETLLRVM
TLSHVLVTACAMQAFHSLFSAQASVACLPAELNAQIITALYDYVPSTSDLQPLLTWLSTM
ERAHVNLGRLQKDLCWAHLPRLFSAAMNCFLSPHSQVVSAAAQTLETLLSECIAPHMEDM
GTVSASAPAPAAYLCKMFRSVEEGLTYRFHAAWDEVLRVLEVFFETCGKQCHPIMRKCLQ
SLCDLRLSPHFPYTAEVDQAVGAAVSTMGPEVLLEAVSLEINGKEETLDFPRSWLLPVLR
DNVQGARLGFFTSYFLPLAAALKTRAQEFTQAGKSVEAKIYDTLQWQVWTLLPGFCTRPT
DVLAAFKGLARTLGMAISERPDLRPTVCQALRTLIHKGCETDAERAEVGRFAKNFLPILF
NVYSQPEEGGGTSAQRRSVLDTVRAYLTITDPQMVCGFLEKASAKLTSPESSEFARLSIL
DLVVAMAPYADEQSLDSLYRTIQPSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVHSHL
QDLQAALLDSLKSAASPAKRPRLKCLFHIVKQLSAEHEPFVTALVPEVILCTKEVSVGAR
KNAFMLLVEMGHAFIRFGPTPEEAMQRFLLLIYVGLTGSVTMISCTVLALTRLFFEFKDH
LEFSVVEQLLQNICLLLASRTRDVVKAALGFLKVTLLLVDTKLLAKHVQTMLEAVGNLSD
DMRRHFRMKLRNLFIKFIRKFGFELVKGLLPAEYHKVLVNIRKAESRSRKQRALKKAAAD
MDEEEAPPPQPRGDSMEEILADSEHEEEEEEERHRSKEWRKQARQKGQAWLKEGEDDEPL
NFLDPNVSQRVLATKPGPKRSRGVSHDFQMSEDGRLIIHEEEEELDDDETKGADEEMADV
LQDVGLRSKKSQKRRFREEPDDEEAEAGTRSQYRAGGSGIHRPLNKEPAFGAEYRSKKGK
GDVKKKGQLDPYAYIPLNRAKLNRRKRAKMQGQFKGLMKGAQRGAKAGRRNRMKSQRS
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcgccggaagcggaaagggggcgctgggcgcggccacacgtggagccggg
cccagcatggcgcggagcgggaggctccgttcgggagccgcggccaagctgaagcgttgg
cggaagggccacagcagcgactccaaccccgagacccgccagcatcgtctggcagcccgc
agccgcttctgcagccggccggcgggagagaaaagtaacttgacggtggatgcggtgaag
ctgcacaatgagctgcagtcggggtccttgcgtgtggagcgggcgagtgacagcgctcag
ctccgtatggaggaggacggtgctgaagaggcggccacagagaagtcctctggcaccttt
ctgagcgggctgagcgactgcaccaacgtcaccttcagcaaggtgcagcgcttctgggaa
tccaactctgctgctcacaaagagatctgtgccgtgctggcagctgtgacagaggtgatc
cgctcccgagggggcaaggagagcgagacagaatactttgctgcactgatgaccacgctg
gaggcagtggagtcccccgagtcactgtctgctgtcgcctacctgcttaaccttgtccta
aagcgggtcccgagcccagttcttattaaaaagttctcagatgcctcaaaagccttcatg
agtattgtgtcctcacaagcctgcagcagctccacgtctgccctgcgatgggtcctctct
tgcctggccacactgctacggaagcaagacttggcagcctggagctaccctgtcaccctg
caggtctatcatggcttgttgagcttttgtgttcataccaagcccaaggtgcggaaagca
gcgcagtatggcgtgtgctctgtcctgaggggcagcgagttcatgtttggcgatgcagcc
cctgagcatcaccctgcagcaccctccaccgccaagttctgtgtgcaggagattgaaaaa
gctggaggtgccaaggaggccaccaccaccctgcatgtccttgccctgttgcgggacgtg
ctgccctgcttccctgcagctgtggtgaagacctgctgtgagaccttgctccgagtcatg
accctcagccatgtgctggtgactgcgtgtgccatgcaagctttccacagcctcttcagc
gcccaggccagcgtggcctgcctgccagctgagctcaatgcccagatcatcactgcgctc
tacgactacgtgcccagcacaagtgacctgcaaccgctgctgacctggctgtccaccatg
gagcgggcacacgtcaacctgggcaggctgcagaaggacctgtgctgggctcatctgccc
cgactcttctctgctgccatgaactgcttcctctccccacactcccaggtggtgtcagca
gcagcacagaccctggagactctcctgagtgagtgcattgctccccacatggaggatatg
ggcaccgtgtccgcatctgccccagcccctgctgcctacctgtgcaagatgttccgatca
gtggaggaagggctgacataccgtttccatgcagcatgggatgaagttctgcgagtgtta
gaggtcttctttgagacatgtgggaagcagtgccatcccatcatgaggaagtgtctccag
tccttgtgtgacctgcgtctctccccacactttccctacactgctgaagtggaccaggca
gtgggggctgctgtgagcaccatgggtcccgaggtgttactggaagctgtgtccctggag
atcaatggcaaggaggagacgctggatttcccccgcagctggctcctgccggtgctgcgg
gacaatgtgcagggagcacggcttggcttcttcaccagttacttcttgcctttggcggct
gccctgaaaaccagagcccaggagtttacccaggctgggaagagtgtggaggccaagatc
tacgacacactgcagtggcaggtctggactctgcttcctggcttctgcacccgtcccaca
gatgtgctggcggccttcaaggggctggcccgcaccctgggcatggccatcagtgagcgc
ccagatctccgccccacggtgtgccaggccttgcgcaccctcatccacaaaggctgcgag
acagatgcagagcgggcagaagtgggtcgctttgccaaaaatttcctgcccatcctgttc
aacgtgtacagccaacctgaggagggtgggggcacaagtgctcagcgccgctctgtgctg
gacactgtccgtgcttacctgaccatcacggatcctcagatggtgtgtggattcctggag
aaagccagtgcaaagctgaccagtcctgagagctctgagtttgccagactctccatcctg
gatctggtagtggcaatggcaccctatgctgatgagcagtccctggattccttgtaccgt
accatccagccttccctccagagcaaagagcgcagcatgcagaagaaggcgtatcgtgtg
ctggaggaggtgtgtgctgctccccacgctccctgccaggccttcgtccactcccacctc
caggacctgcaggcagcgctgctggactcactcaagagcgcagcatccccggccaagagg
ccacggctgaaatgcctgttccacattgtgaagcagctgtctgcagagcacgagcctttt
gtcactgccctggtcccagaggtcatcctatgcaccaaggaggtgtcagtgggggcccgc
aagaatgccttcatgctgctcgtggagatgggccatgcttttatccgctttggacccacc
cctgaagaggctatgcagcggttcctgctcctgatctacgtggggctcactggctcagtc
accatgatcagctgcaccgtgctggcactgacccgcctgttctttgagttcaaagatcac
ctggagttcagtgtggtggagcagctcctgcagaacatctgcttgttgctggcctcccgc
acgcgggatgtagtcaaggcagccctgggattcctgaaggtcacactactgctggtggac
accaagctcctggccaagcatgtccagacgatgctggaggctgtggggaacctttcagat
gacatgaggcgccacttccgtatgaagctgcgaaacctcttcatcaagttcatccgcaag
tttggctttgagctggtgaaggggctgctgccagccgagtaccataaggtgctggtgaac
atccgcaaggcagaatcccggagccgcaagcagcgtgccctgaagaaggcagctgcggat
atggatgaggaggaggcaccaccaccacagcccagaggagacagtatggaggagatcctg
gctgactcagagcatgaggaggaggaagaggaggaacggcatcggagcaaggagtggagg
aagcaagcacggcagaagggccaggcatggctgaaggaaggggaagatgatgagcccctc
aacttcctggaccctaatgtgtcccagcgggtgctggccaccaagccaggccccaagcgg
tccagaggagtgagccatgatttccagatgtctgaggatggacgcctgatcatccatgaa
gaggaagaggagctggatgatgatgaaaccaaaggagcagatgaggagatggcagatgtg
ctgcaagatgtggggctccgcagtaagaaaagtcagaagcgtcggttcagagaggagcca
gacgatgaggaagctgaggctggaacccgttctcagtatagagctggaggctctgggatc
catcggccactgaacaaggagccagccttcggtgcagagtatagatccaagaaaggtaaa
ggtgatgtgaagaagaagggccaactcgacccctatgcctacatccccctgaacagagct
aaactcaacagaaggaagcgggcgaaaatgcagggccagttcaagggcctgatgaaggga
gcccagcgcggggccaaggccggccgcaggaaccgaatgaagtcccagcgctcctga
DBGET
integrated database retrieval system