Taeniopygia guttata (zebra finch): 100232543
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Entry
100232543 CDS
T01082
Symbol
RARS1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100232543 (RARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tgu01007
]
100232543 (RARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100232543 (RARS1)
03029 Mitochondrial biogenesis [BR:
tgu03029
]
100232543 (RARS1)
Enzymes [BR:
tgu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
100232543 (RARS1)
Amino acid related enzymes [BR:
tgu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
100232543 (RARS1)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100232543 (RARS1)
Prokaryotic type
Other AARSs
100232543 (RARS1)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100232543 (RARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Cnn_1N
LisH_TPL
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
100232543
NCBI-ProteinID:
XP_030139677
Ensembl:
ENSTGUG00000001499
UniProt:
A0A674HE77
LinkDB
All DBs
Position
13:5582256..5598568
Genome browser
AA seq
661 aa
AA seq
DB search
MEARVAQSAARLARQENEIKLLTAEIERLKNFGCLGVSPSLEGLRDENAKLKYRLNFLKK
SLQEERSKSTKSMININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQPKFGDYQCNSAMG
ISQVLLKTREQKVSPREIAEKIVKSIPANECIEKVEIAGPGFINVHLRKDFVSKQLSSLL
INGVQPPAIGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFVGYDVLRLNHLG
DWGTQFGMLIAHLQDKFPDYLSVSPPIGDLQAFYKESKQRFDTEEEFKKRAYQCVVLLQS
KNPDFIKAWNLICDVSRREFQKIYNCLDITLIERGESFYHEMMKDIVKEFEDKGFVQVDD
GRKVVFVPGFPVPLTIMKSDGGFTYDTSDLAALKHRLCEEKGDILIYVVDSGQSVHLQTV
FAAGQMIGWYDPKVTRVAHAAFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRAMDKLKD
KERDKVLTPEELKAAQTSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLYAFT
RIRAIARLANIDEQMLQKAAREEVLVLDHEKEWKLGKCILRFPEILQKILEDLLLHTLCD
YLYELATTFTEFYDSCYCVEKDRQTGQIVKVNMWRLLLCEATATVMAKGFDILGIKPVQR
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcgcgtggcgcagtccgcggcgaggctggcgcggcaggaaaacgagatcaag
ttgttaactgcagaaattgagcgtctgaagaactttgggtgcttgggagtctccccgagt
ttggaagggctgcgagacgaaaacgcaaaactcaagtaccggttaaacttccttaagaag
agccttcaagaggaaagaagtaaatcaaccaaaagcatgattaatatcaacagctgtctc
caggagatctttggagctgccattcaggctgcctacccagacttagaaaaccctcctctg
gtggtgacaccaagccagcagcccaaatttggggactaccagtgtaacagtgccatgggc
atatcacaggtactgctcaaaaccagggaacagaaggttagcccacgagaaatcgcagag
aaaatagtaaaaagtattcctgccaatgagtgcattgagaaggtcgaaattgctggtcct
ggttttatcaatgtccacttgagaaaggattttgtgtcgaagcagctgagcagtttattg
atcaatggagttcaaccaccagctattggcaaaaggaaaaaggtggtggtggatttttcc
tcccccaacattgccaaggagatgcacgttgggcacctgcgctctaccatcatcggggag
agcatgtgccggctcttcgagttcgtgggttatgatgttctgaggttgaaccatttagga
gattggggtacccagtttggaatgctcattgctcacctccaggacaaatttccagattac
ttaagtgtttctcctcccattggggatctccaagctttttacaaggaatccaagcagagg
tttgacacagaggaggaatttaagaagcgagcttaccaatgtgtggtgctgctgcagagc
aaaaaccctgacttcattaaagcctggaatctcatctgtgatgtgtcacgcagagaattc
cagaaaatctacaactgtttggacatcacactcatagagagaggggagtccttctaccat
gagatgatgaaagacattgtgaaagaatttgaagataaaggatttgtgcaggttgatgat
ggccggaaggtcgtgttcgtcccgggttttcctgtcccactgaccatcatgaaatcggac
ggaggtttcacgtatgacacgtcagacctggctgctctgaagcacaggctgtgtgaagag
aagggtgacatcctcatctacgttgttgacagtggccagtctgtgcatctccaaacggtg
tttgcagctggacagatgattggctggtacgatcccaaagtcaccagagtggcccatgct
gcctttggagtggtcctgggagaagacaagaagaagttcaaaactcgttcaggggacacg
gtgcgtctcatagacctgctggaggaaggactgaaacgagccatggacaagctgaaagac
aaggaacgggacaaggtcctgacaccggaagagctgaaagctgcccagacgtcggtggct
tttggatgcattaaatatgcagatctgtcccacaacagactcaatgattacgtgttctcc
tttgacaagatgctggatgaccgagggaacacagctgcctatctgctctatgccttcaca
cggatcagggcaattgctcgcctggccaacatcgatgagcagatgctgcagaaggcagcc
agggaggaggtgcttgtccttgaccatgagaaggagtggaaattgggcaagtgcatcctg
aggtttcctgagatcctgcagaagatcctggaggacttgttattgcacacactctgtgac
tacctgtatgagctggccaccaccttcaccgagttctacgacagctgctactgcgttgag
aaggacaggcagactggccagattgtgaaagtgaacatgtggaggctgctgctgtgcgaa
gccactgccaccgtcatggccaaaggattcgacatcctggggattaagcctgtgcagagg
atgtag
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