Taeniopygia guttata (zebra finch): 100232577
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Entry
100232577 CDS
T01082
Symbol
WARS1
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100232577 (WARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tgu01007
]
100232577 (WARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100232577 (WARS1)
Enzymes [BR:
tgu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
100232577 (WARS1)
Amino acid related enzymes [BR:
tgu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
100232577 (WARS1)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100232577 (WARS1)
Prokaryotic type
100232577 (WARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
100232577
NCBI-ProteinID:
XP_002200606
Ensembl:
ENSTGUG00000012762
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All DBs
Position
5:complement(50206756..50226950)
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AA seq
473 aa
AA seq
DB search
MADSLNCDLKSLSPLQLFERVTEQGEKVRALKAGKAPKDEIDAAVRMLLSLKLSYKTTTG
QDYQAGLPPKDLVLINNGTTKEEDEDLVDPWNVQTSNAKGVDYDKLIVRFGSSKIDTDLI
NRIERAIGQKPHHFLRRGIFFSHRDMDQILDAYENKKPFYLYTGRGPSSQAMHVGHLIPF
LFTKWLQEVFDVPLVIQLTDDEKYLWKDMTVEKAYEYARENAKDIIACGFDINKTFIFSD
LDYLGTSAGFYKNIVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPQIF
NGKENIQCLIPCAIDQDPYFRMTRDVAPRIGQPKPALLHSVFFPALQGAQTKMSASDPNS
SIFLTDTPKQIKTKINKHAFSGGRDTIEEHRKYGGNCDVDVSFMYLTFFLEDDDRLEQLK
QAYTSGELLTGELKKVLIETMQPLVAAHQERRKQVTDEIVKQFMTPRKLAFEF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagcctgaactgtgatttgaagtctctgagtccacttcagctgtttgaaaga
gtgactgaacaaggagagaaagtcagagcactgaaagcaggaaaagcaccaaaggatgaa
attgatgcagcagtgaggatgctcttatcattaaaactgtcatataaaacaacaacagga
caagattatcaggcaggcttgcctccaaaagatcttgtattaataaacaatggtacaact
aaagaagaggatgaggatttagtggatccctggaatgtgcagacatcaaatgctaaaggc
gtggattatgacaagctcatagttcggtttggcagcagtaaaattgacacagatctgatt
aatcgaatagaaagagctattgggcaaaaacctcaccactttctacgtagaggaatcttt
ttttcccacagagatatggaccaaatacttgatgcttatgaaaataagaagcccttttac
ctttatacaggcagagggccatcctctcaggcaatgcacgttggtcatctcatcccattt
ttgttcacaaagtggcttcaagaagtatttgatgttcccttggtaatacagttaactgat
gatgagaaatacctttggaaggacatgacagttgagaaggcatatgaatacgctagagaa
aatgcaaaagacatcattgcatgtggttttgacatcaataaaacctttatattttcggat
ttagactatttagggacaagtgctggattctacaaaaacattgtcaaagttcagaagcat
gtcacgtttaaccaagtgaaaggaatctttggctttacagacagtgattgcattggtaag
atcagctttcctgctatccaagctgctccatccttcagttcatcatttccacagatattc
aatggcaaagagaatattcagtgtcttatcccatgtgcaattgaccaggatccttatttt
agaatgacccgcgatgtagcaccgagaattggacagcctaagccagccttactccactca
gtcttcttcccagccctacaaggagcacagaccaaaatgagtgctagtgacccaaactcc
tccatcttcctcactgatacacccaaacaaatcaagacaaagattaacaagcacgccttc
tcgggaggcagggacaccattgaggagcacaggaagtacggaggcaactgtgacgttgat
gtttcttttatgtacctgactttcttcctggaggatgatgacaggctcgagcagctgaag
caggcctacaccagtggggagttgctcacaggggagctgaagaaagtacttattgaaaca
atgcagcccttggtagcagctcatcaagagagaaggaagcaggtcacagatgaaattgtg
aagcagttcatgactccaaggaagctggcttttgaattttga
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