Taeniopygia guttata (zebra finch): 100232651
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Entry
100232651 CDS
T01082
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04110
Cell cycle
tgu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100232651 (SMC1B)
04114 Oocyte meiosis
100232651 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100232651 (SMC1B)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100232651 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
100232651 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
100232651
NCBI-ProteinID:
XP_002187833
Ensembl:
ENSTGUG00000011831
LinkDB
All DBs
Position
1A:60000823..60029193
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AA seq
1238 aa
AA seq
DB search
MGYLKVLVVKDFKSWRGQQVIGPFMRFNCIIGPNGSGKSNIMDAVSFVLCEKTANLRVKS
VRELIHGAHVGKPVSSTASVKIVYCEEDGEEKTFSRVIRGSCSEFLFNDKSVSRSAYISE
LEKIGILVKARNCLIFQGTVESIAMKKPKDRTQLFEQISNSWEYAEDYEQKKKKMEQAEQ
DAQFNYNKKKSVAAERKQAKIEKEEAEHYQMLIKELDEERIQLQLFQLYHNEKQISFLKN
NLDEKNMEAYTKKETLSKAEDSFKVKKKMFGILNRDQQHMEKEMKTLEASLVQQRALYIK
AKENTSYQIKKVEISKKSLTDKEKTCNKEKQNIKELEMELNDIEKAWRAFEEKTEEERMQ
RAADIELGESQLERYKKLKDTARKQVAILAQQLEKLRWEDKGDQERLKLNRRKKTEIEET
IKQTVEQVEEHEKRIEKLEEYAKICIGSLTEKKQQEEVLAKEIENATTRMAEVNKDLNKI
VGELQNAKIDYHEGRREQMRAEILESLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFSK
YMTAIVVATEKVARDCIRFLKQERAEPETFLALDYLDVKPINEKLREIKEAKMMVDVVQT
QFAPVKKVIQFVSGNALICETVKEAKHIAFDGPVRLKTVSLDGTLFLKSGVISGGSSDLR
FKARCWDEKEISKMKEGRDSLINELKDLMRIRRKEADLKQLRAQCQGTQTRLKYSQSELD
LIKKKHLANLFMEKSKLQSELLNVEAQYDMLNEGVVQRKLKIEEFQKKINKVEDDVFQEF
CEEIGIENIRVYEQEHVRQQEEIDKKRLEFENQRTRLNIQLEYKHDHLQKLTNSVSKLRE
TMHKDEAEIINLQKDEKKLLKKVNELLEEQQHLKDRLSAHKSELTKSQNEVEESRKMMLT
LNREATKLQREATALETSLEEMRLRRHNLLLECKVQDLKIKLLAGSLDDISEVEPGTEIE
GTQTLSGIYEREERIQIDYSTLDLDLKELESDKDIEDRVKQMQQEIKSKEVTLMKTAAPN
LRAGEKLLIARDKFQESIDAFETSRKEARICKQEFEEVKKRRYDLFSQCFEHASIAIDRI
YKQLCRNSSAQAFLSPENPEEPYLEGIGFHCVAPGKRFMPMDSLSGGEKTVAALALVFAV
HSFRPAPFFILDEIDAALDNTNIDKVSSFIREQAHEQVQMIVISLKEEFYCKADALIGVC
PEHNEIMFSQVLTLDLTEYPEGEEQDTAEKPSQGSLFE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggggtacctgaaggtgttggtggtgaaggactttaagtcgtggaggggccagcaggtt
atcgggcccttcatgaggttcaactgcatcatcgggcccaatggatcaggaaaatctaat
attatggatgctgttagctttgtgttgtgtgaaaaaacagcaaatttgcgagtcaaaagt
gttcgagaacttattcacggagcacatgttggaaaacctgtttcttctacagctagtgtg
aagatagtatattgtgaggaagatggggaagaaaagacattttcaagagttatccgtggt
agttgttctgagtttcttttcaatgacaagtctgtcagccgatctgcatacatatctgag
cttgaaaaaataggcattcttgtcaaggccaggaattgccttatttttcagggaacagta
gaatcaattgcaatgaagaagccaaaggatagaactcaactttttgaacaaattagtaat
tcatgggaatatgctgaagactatgaacaaaagaagaagaaaatggagcaagcagaacag
gatgcacagtttaattataataagaaaaaaagtgtggcagcagaacgcaaacaagcaaag
atagaaaaagaggaggcagagcattaccagatgttaatcaaggaactggatgaagaaagg
atacagctgcagctttttcagctttatcacaatgaaaaacaaattagctttctgaaaaac
aatttggatgaaaagaatatggaggcttatacaaagaaagagactctttctaaagcagaa
gattcatttaaagtcaagaaaaaaatgtttgggatactaaacagggaccagcagcatatg
gaaaaagaaatgaagactctggaggcatcactggttcagcagagagccctctatataaaa
gcaaaggaaaacacatcctaccaaatcaagaaagtagaaatttctaaaaaatctctaacg
gacaaggagaaaacctgtaataaggaaaagcagaatataaaagaactagagatggaattg
aatgatattgagaaggcatggagagcatttgaggagaaaactgaagaagagagaatgcag
agagcagcagatattgagctgggagaaagtcagttagagcggtataaaaagctaaaagac
actgcaagaaagcaagtagctatactagcccagcagctagaaaaacttcgttgggaggat
aaaggagatcaagaaaggctgaaacttaatcgcaggaagaaaactgaaattgaggaaacc
attaaacagactgtggaacaggtggaagagcatgaaaaacgcatagagaaattggaagaa
tatgctaaaatatgcattggatcactaacagaaaaaaaacagcaggaggaagtgctggct
aaggaaattgagaatgcaacaacgcgaatggctgaagtgaacaaagacttgaacaaaata
gttggtgaactgcagaatgccaaaattgattaccatgaaggaaggcgtgagcagatgaga
gcagagatcctggaaagtctaaaaaggctatatccggattctgtgtttggaagattgctt
gacctgtgtcatcctattcataaaaaataccagcttgctgttaccaaggtattcagcaaa
tacatgactgctattgttgttgccactgaaaaagtagcaagagattgcattcggttccta
aaacaagaacgagctgaacctgaaacttttctcgctttggattaccttgatgttaaacca
attaatgagaagctaagggagataaaagaggctaaaatgatggtggatgttgtacaaaca
caattcgctccagtgaaaaaagtgattcagtttgtgagtgggaatgccttgatctgtgaa
acagttaaggaagcaaaacacattgcatttgatggaccagtaaggctgaaaacagtgtct
cttgatggaacgttatttttgaaatctggagtgatttctggaggatcaagtgatttaaga
tttaaagctagatgttgggatgagaaagaaattagtaaaatgaaagaaggaagagatagc
ttgattaatgagttaaaggacttaatgaggatcagacggaaggaggctgacttgaagcaa
ttgcgtgctcagtgccaaggaactcagacacgacttaaatattcacagagtgaattagac
cttattaaaaagaaacatcttgctaatctcttcatggaaaaatcaaaactgcaaagtgaa
ctgttaaatgttgaggctcagtatgatatgctgaatgaaggagtagtacaaagaaaacta
aaaatagaagagtttcagaaaaaaattaacaaggttgaagatgatgttttccaggaattc
tgtgaagaaattggtatagaaaatattcgtgtgtatgaacaagagcatgtgagacaacaa
gaggaaattgataagaaaagactggagtttgaaaatcagaggacaagattgaacattcag
ctggagtataagcatgatcatctacaaaaattaacaaactcagtcagcaagttgagggag
acaatgcataaagatgaagctgagataatcaacctacagaaggatgagaaaaagcttcta
aaaaaagttaatgaacttctggaggagcagcaacaccttaaggatagactaagtgctcat
aaatctgagcttacaaaaagccaaaatgaagtcgaagagtccagaaagatgatgttaact
cttaatagagaagccacaaagttgcagagggaagctacagctctagaaacctcactggaa
gagatgagattaaggagacataatctgttgcttgaatgcaaggtgcaggacttgaaaatc
aagttactggctggatcactggatgacatcagtgaagtagagccaggaactgaaatagaa
ggcacccagactctatcaggcatctatgaaagggaagagagaattcagatagactacagc
accctagaccttgacctaaaggaactagaatctgataaagatatagaggatcgtgtgaag
caaatgcagcaggaaatcaaatctaaagaggtcacattaatgaagacagctgctccaaac
ctgagagcaggagagaagttactgatagctcgggacaagttccaagaatcaatagatgct
tttgagaccagcagaaaggaggccagaatatgcaagcaggaattcgaagaggtgaaaaaa
aggagatatgacctatttagccagtgctttgagcatgcctccatagccattgacaggatc
tacaagcagctttgcaggaacagtagtgctcaggccttccttagcccggagaatcctgag
gagccctatctggaaggcattggctttcactgcgtggctccgggcaagcgctttatgccg
atggacagtctgtcaggaggggaaaagacagtggcagccctggcccttgtgtttgctgta
cacagctttcgtccagctcctttttttattttggatgagatagatgctgcactggacaac
acaaacattgataaagtctcaagtttcattagagaacaggcacatgaacaagtccaaatg
atagttatttccctgaaggaagagttttactgcaaggcagatgcattgattggagtgtgt
cctgagcacaatgagatcatgttcagccaagtcctgaccctggatcttaccgagtacccg
gagggcgaagagcaggacacagcagagaagcccagccaaggttctctcttcgagtag
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integrated database retrieval system
