Taeniopygia guttata (zebra finch): 100232693
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Entry
100232693 CDS
T01082
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X3
KO
K14407
cleavage stimulation factor subunit 2
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100232693 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100232693 (CSTF2)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100232693 (CSTF2)
U7-dependent histone pre-mRNA processing factors
100232693 (CSTF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100232693
NCBI-ProteinID:
XP_012428450
Ensembl:
ENSTGUG00000002253
UniProt:
A0A674G7F3
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Position
4A:complement(830879..837930)
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AA seq
574 aa
AA seq
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MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPM
GGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGNLQLSPVGPARPASIERV
QVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAP
MHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPR
VLEARALEARGLEPRVLEPRVLEARAMEARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPL
NMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQ
VLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgggaccccgccgtggatcgctccctgcgctccgtgttcgtg
gggaacatcccgtatgaggccacggaggagcagctgaaggacatcttctcggaggttggg
cccgtggtcagctttaggctggtgtacgacagggagacgggcaagcccaagggctatggc
ttctgcgagtaccaggaccaggagacggcgctcagcgccatgcgcaacctcaacgggcgc
gagttcagcggcagggcgctgcgcgtggacaacgccgccagcgagaagaacaaggaggag
ctcaagagcttgggcacaggtgcacccatcatagagtcaccctatggggaccctgtcaac
ccagaggatgcccctgagtccatcagccgggcagtggccagcctgccacccgagcagatg
tttgagctgatgaagcagatgaagctgtgtgtccagaacagcccccaggaagccaggaac
atgctgctgcagaacccccagctggcttatgcactgctgcaggcccaggtggtcatgagg
atcgtcgacccagagatcgcgctgaaaatcctgcatcgccagaccagtgttcctcctctg
atcccgggcaaccagcaggcagtgccagggccggggcctgggccggggccagggcctggg
ccagggcccaacgcgcagctgaacccgcagaacaccccgtcatcccagccacagcccatg
ggcgggatgcacgtcaacggtgctcctcctctgatgcagccacccatgcaggggggagtg
ccagccccaggacagatggcagcccctgtgcagggcccaggccctggccccatggctcca
ggagggaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgcgtt
caagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagtggc
ccgccgccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctgctc
tcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggagcccct
atgcaccatatgcctggtcatgacagccgtggccccccccatgagatgagggggggaccc
atgggagaaccccgaccactgatgggagagccgcgggggcccttgatggatgctcgagtt
ggaagagatccccgagggctggagccacgagggctggagccgcgcgggctggagccgcgg
gtgctggaggcgcgagcgctggaggcgcggggcctggagccgcgggtgctggagccacga
gtgctggaagccagggccatggaggccaggggcctggagccccgggggctggagcctcga
gggcccggtcccaacccgcggggcccgatgcctggtgggatacagggtcctgggccgctt
aacatgggagccagtggcccgcaggggccccgccaggttcctaacatggctggggcaggc
atgcagggaggaggcatacctggggcaggagtccaaggggctggtcagcctggaggcttt
agccctggacagagccaggtcacaccccaggatcacgagaaggcagcactgatcatgcag
gtcctgcagctgacagcagaccagatcgccatgctgcccccagaacagcggcagagcatc
ctcattctgaaggagcaaatccagaaatccacgggggcaccctga
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