Taeniopygia guttata (zebra finch): 100232733
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Entry
100232733 CDS
T01082
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100232733 (ZSWIM8)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
100232733 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
100232733
NCBI-ProteinID:
XP_002193327
Ensembl:
ENSTGUG00000006902
LinkDB
All DBs
Position
6:complement(14660183..14720329)
Genome browser
AA seq
1822 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPTP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PLPGITYSSTDKKNSFCWVKAIQQRSCRLQCAESACEAGRTHGQEAGGQCVQPGDRLRPS
PQEPAVRPKELSGKRKVVSETPQRVLRRLSAEGDKAVYKTAVSKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDAFEEDGGVYFSEG
PEPTLRSSSMAKKPPKDPVGEMGSGDDDLPSADENSGGASLKPEEVGENGAAGGGDDGEE
EDDYQVYYLNPQEVAKEDDDKAEGGIEEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SNEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHAAQSAAAIQQLPGTSVTQQAAVSTAVQSSPENFVEK
STQESSQRSPCEPASEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGSWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSTGGAR
ATSEAARGLADSRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTVAGPAMAHTHTQ
GLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTAPS
LAATAVSFPGVPVPSVTQIAVHPYHSETGLSLSSNVALGSVHAGSTFPAIQGASLTTLSS
QPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPP
YTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTP
AFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNL
KRSKQTKELWQRVSLEMTTFSP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactccgat
cgctttgaggaagactctctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggaggaagcaatcggctggacccaattcccccactgtgaaaatgaaagat
gggctggtgatcccattggtggaactctctgcaaaacaggttgcatttcacattccattt
gaggtggtggagaaagtttatcctccagtgcctgaacaactgcagcttcgaatcgccttc
tggagtttcccagaaaatgaggaggatatcaggttgtactcgtgcttggcaaatggcagt
gcagatgagttccagcgaggagagcaactcttccgggtgagggctgttaaagaccctctc
cagataggtttccatctgagtgccactgtggtgcccccgcagatggtgccccccaagggc
gcgtacaacgtggcggtgatgtttgaccggtgccggatcacgtcgtgcagctgcacctgc
ggcgccggggccaagtggtgcgctcacgtcgtggcgctctgcctcttccgcatccacaac
gcatctgcagtgtgcttacgagcacctgtttctgagtctctgtctcggctacaaagagat
cagttgcaaaaatttgctcagtacctaatcagtgaacttccacaacagattcttccaaca
gctcagcgcttgctggatgagttgttatcttctcagtctactgccatcaacacagtatgt
ggagccccagatcccactgctggaccttctgcatcagatcaaagcacctggtacttagat
gaatctactctgagtgacaacataaagaaaacccttcataaattctgtggacccactcct
gttgttttcagtgatgtgaattcaatgtatctgtcttccactgagccaccagctgctgct
gagtgggcttgtctgctgcgtcccctgcgaggaagagaacctgaaggaatctggaacttg
ctttccattgtgcgggagatgtttaagagacgggatagcaatgcagctcctttgctggag
attctgactgaccagtgtctcaactatgagcagataactggctggtggtacagtgtgcga
acatccgcgtcacacagcagtgccagtgggcacacaggacgcagcaatggccagtcagaa
gtagctgctcatgcttgtgcaagcatgtgtgatgagatggtggttctttggaggctggct
gtccttgacccaactattagtccacagaggcgcagggatctttgctcacagctcagacag
tggcagctgaaagtcatagataatgttaagaggggtcagcacaagaaatcactggagaag
ctcttccaaggtttcaagccagctgtagaagcctgttacttcaactgggaggaagcttat
ccccttcctgggattacatacagcagcactgacaagaagaactcgttctgttgggtaaag
gccatccaacagaggagctgccggttgcagtgtgcagaaagtgcctgtgaggctggtagg
acccacggccaggaggccgggggacagtgtgtgcagcccggggacaggctgcggccctct
ccccaggagccagcggttcgtcccaaagagctcagcggaaagcggaaagttgtctctgaa
acgccgcagagggttctgagacggctctcggcagaaggggataaagctgtctataagact
gcagtgagcaaagcaaagttgccagtgagcaaaggcttgaccagtaaacatagtgggaaa
cgccgtatgagcagtgaggacagctctctggagccagacttggcagagatgagcctggat
gacagcagcttggcactgggggcagaagccagtaacacctttagttttacagaaagtcca
ctgagcaggagctacagggatgcctttgaggaagatggtggagtgtacttctccgaggga
cctgagcccactctcaggagcagttccatggccaagaaaccacccaaggaccctgtaggg
gagatgggtagtggtgatgatgacctgccttctgcagatgagaactctggtggtgcgagt
ctgaagccagaagaagtgggagagaatggtgcagcagggggaggggatgatggagaagag
gaagatgattaccaggtatactatctgaatccacaagaggtagccaaggaagatgatgac
aaagctgaagggggaattgaagaggagcaggatatatttgctggtataaagcctctggaa
caggagaaccggatggagatcctgtttgcgtgtgcagaggcactgtatgcacatggatac
agtaatgaggcttgccgcttgactgtagaacttgccagggacctactggccaaccctcca
gatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtgtcaaccagcaaa
cagacatggatggcaaccaacaccttatctaaagctgctttcttgctgactgtcttgagt
gagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggagctgcag
agaccgcctgcctctaccaaggctctggaggtgaagctggcttatcaggaatctgagatt
gcagccctcttgaaaaagattcctttgggcaccaatgagatgaacactattcgaggaaga
gctgaagaactgcgagaagggaccttgtgtgattaccgtcctgtcctgcctctgatgttg
gcaagctttatatttgatgtcctgtgcactccagtggtttctcctacaggctctagaccc
ccaagccgtaactggaataatgaaatgcctggagatgaagagcttggttttgaggcagct
gttgctgctcttggtatgaaaacaactgtcagtgaagcagaacatcctctgttgtgtgaa
ggcacacgaagggagaaaggagacctggcactagccctgatgattacttacaaggatgat
cagtctaagctgaagaagattttagacaaactcctggacagagagagtcaaactcacaaa
ccacagacgttgagttctttctactcatccagcaagcctacagttgccaatcaaaaatct
ccttccaaacatgctgcccagtctgctgcagctatccagcagcttccagggacttctgtc
actcagcaagctgctgtaagcactgcagtccagagcagtcctgagaactttgtagaaaaa
agtacacaggagagctctcagaggtccccctgtgagccagcttcagaggccactgttttg
aaacaagagggaaaggtccccagtcgtctggcccttggaaaccgaggtggatataatggg
agatgctggggttcaccggtcaggcagaagaagaaacacacaggcatggctagtattgac
agcagtgctcctgaaaccacctctgacagttctccaacgcttagtcggcgtcccctacgt
gggagctgggcaacaacatcctggggcagaggacaggacagtgacagcatcagcagttct
tcaagtgattctctgggatcttcctcttccagtggcagtaggagagcaagtgggggagcc
cgtgcaaagactgtggaagttggcaggtataaagggaggcggctggagagccatgctcct
catgtcccaaaccagccctcagaggcagctgctcacttctactttgaattggccaagaca
gtccttatcaaagcaggtggaaacagcagtacctctatcttcacccacccttcctccagt
ggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagattgggctgtat
gcactagggctgcacaactttgtgtctcccaactggctctctcgaacttactcctcccat
gtctcttggatcacagggcaggccatggagattggtagcgcagccttgaacatcttggtg
gagtgttgggatggacatctaactcccccagaggtggcatcactggcagacagagcttca
cgggccagagactccaatatggtgcgggcagctgctgaactggcactcagctgcctgcct
catgcccatgccctgaacccaaacgagatccagagggctttggtgcagtgcaaggaacag
gacaacctgatgctggaaaaggcctgcatggcagtagaagaggcagctaaaggaggtggt
gtgtacccagaagtcctctttgaagtagctcatcagtggtactggctttacgaacagact
gttggtgggaccccagcccagagagaaggagccactggctgcagtaccggtggcgcgcgg
gccacgtctgaagcagcgcgtggcttggcagacagccgggtgacctcagagccgaccacg
gtgacggtggcagctgcagtaactgcagcagcaactgtcatgccagtgatctctgtgggg
tcaaccatgtaccagcagcatacggtggcagggccagcaatggcacatacacacacgcag
ggtctccacccttacaccacccttcagactcacatcccctgtaacccccagtatattgga
catactatccagcacatgccacgcccagctgtcttcccagtccctggctcggcgtatccg
cagggtgtccatccagcattcataggggcacagtacccttactcagtaacagcaccgtcc
ctggcagctacagcagtgtccttccctggcgtgcccgtcccctccgtgacgcagattgcc
gtgcatccctatcacagcgagacgggactgtcgctgtcttccaatgtagcgctaggcagt
gtccatgcaggatcaacgttcccagcgattcagggtgcttccttgacaactttgtcctca
cagcccaactcccttgttaccgggggttttcctgccgaggatgagcagcacagtcagcct
gtgagcccccagggtctgcactacctccattctgcataccgagttgggatgctggctctg
gagatgcttggccgaagagctcacaacgaccatcccaacaacttctcccgcagcccgccc
tacactgaggatgtaaaatggctccttgggttagctgcaaagttaggtgtaaactatgtg
catcagttttgtgttggtgctgccaagggggtgttgagcccttttgtgctccaggagatc
atcatggaagctctacagaggctcaaccctgcccatgtgcacaaccacctgcgcacccca
gccttccaccagctggtgcagaggtgccagcaggcctatatgcagtacatccatcatcgg
ctgatccatctcactccagctgactacgatgactttgtgaatgccatccgcagcgccaga
agcgccttctgcctgactcccatgggcatgatgcagtttaatgatattctccagaaccta
aagcgcagcaagcagacaaaggagctgtggcaaagggtctcactggaaatgaccaccttc
tcaccataa
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