Taeniopygia guttata (zebra finch): 101233505
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Entry
101233505 CDS
T01082
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
101233505 (CTCFL)
03036 Chromosome and associated proteins [BR:
tgu03036
]
101233505 (CTCFL)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101233505 (CTCFL)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101233505 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451
DUF7129
zf-C2H2_7th_ZNF462
zf-C2H2_11
zf-C2H2_jaz
C2HC_ASCIZ
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
101233505
NCBI-ProteinID:
XP_030144579
LinkDB
All DBs
Position
20:12304463..12317260
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AA seq
433 aa
AA seq
DB search
MTFMAFHDRELAQIRLLQKEGQEMLAGSQVTEKPPDMLLMEIDRDNDAIAFENNIQQLSP
SEEGEGKEFFSTVEETESQSCKGGDDLSDLFNESEEQEYPTASENLRNLKFEACAPHQEK
AKLSSLRCHLRSHSDEKRHVCHLCPKAFHTAALLHNHVNAHTGNKPHKCSECDAAFVTRG
ELSRHRRYKHTLEKPFKCTICEYSSVEASKMRRHVRSHTGERPYPCHLCSYASKDAYQLK
RHMLTHTGEKRYECYICQARFTQSGTMKIHVLQKHGENVPKHQCPHCSTFLSRKRDLGVH
LRNLHSYMEEAVKCRDCGAAFHERYAFLQHRRAHRSEERFRCAQCSCTCNQSNTCKRAEN
CGLVRAKTATPRKGRKGKNKIPENPKHAKPEVTLKLFPDDSTVKNEHCASEIVPVLDGTE
TATPREHRTETTH
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacattcatggcgttccatgaccgggagctggcgcagatccgtctattgcaaaaagaa
gggcaagaaatgcttgcaggcagccaggtgacagagaaaccaccagacatgctcctgatg
gagattgacagagataatgatgccattgcatttgaaaataacatccagcaactgagccca
tctgaagagggggaaggaaaggaatttttttccacagttgaggaaacagagagtcagagc
tgcaaagggggtgatgatttgtcagacttattcaatgaaagtgaagagcaggaatatcca
actgcatcagaaaatctcaggaatctaaaatttgaggcttgtgctccacatcaggaaaaa
gccaagttatcaagtcttaggtgtcatttgagatcccattcggatgagaaacgtcacgtg
tgtcacctctgcccgaaggccttccatacagcagctctgctgcataaccatgtgaacgca
catacagggaacaagccccataaatgcagtgagtgtgacgcagcctttgtgacccgaggg
gagctttcaagacacaggaggtacaaacacactttggagaagcctttcaagtgcacaata
tgtgaatactctagtgtagaagccagcaagatgaggcgccacgttcgctcgcacacggga
gagcgaccctacccctgccacctgtgcagctatgccagcaaagatgcctaccagctgaaa
aggcacatgttaactcacacaggtgaaaaacgctatgaatgttacatttgccaagccaga
ttcactcaaagtggtaccatgaaaatccatgtgttacagaagcatggagaaaatgtgcca
aaacaccaatgtccacattgtagtactttcctttcccgaaaaagagatttgggtgtccac
ctgaggaatctgcactcctacatggaagaggcagtgaagtgcagggactgtggggcagct
ttccacgagcgctacgctttccttcagcacaggagggctcacaggagtgaggagagattc
aggtgtgcccagtgcagctgcacgtgtaaccagagtaatacgtgtaagcgtgctgaaaat
tgtggattggtgagggcaaaaactgctacacccagaaaaggaagaaaaggcaaaaataaa
atccctgagaacccgaagcatgctaagccagaagttaccctgaaattattcccagatgac
tctactgtgaaaaatgaacactgtgccagtgagatcgttcctgttttagatgggacagaa
acagcaacaccgagagaacacagaacagaaacaactcattaa
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