Taeniopygia guttata (zebra finch): 101233672
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Entry
101233672 CDS
T01082
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101233672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
101233672
03036 Chromosome and associated proteins [BR:
tgu03036
]
101233672
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101233672
Coactivators
SAGA/TFTC/STAGA complex
101233672
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101233672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
101233672
NCBI-ProteinID:
XP_030137966
LinkDB
All DBs
Position
11:2053322..2201543
Genome browser
AA seq
983 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKALSDLVGSLESQLAGGRGPAEPPPPRTSAPSQQPQQGS
LAGGSSPGRQQPGRPAPPPAPGAGEAAGRPGSAGSRASAQGPLPSPSPPAAAAAAAGRGA
SVNSSSVQQSHGAAPGGGSPAAPAPPQPAAPAQPVNNHVAAAAAAARDAGSPGPGPSPTA
ADGAPGAAGGGGAAEAAEGAAAAPAPCPGPAAPNGEGAGARAAAVPPVGGHGGAAAAQPQ
PAPGALPAGTALGASASPAPAPPAPGSAPPAPAAPAAPKPAVTAKAGAALPAAPQAVSPR
PALGAAPRLVAPQLIVRPPPPHATIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQM
QAQVQTQGQGPANVSPRLSVPTAGPVFRLSTAQQPTSVATSSVRLGLPVQAKVVPSTAAP
ASATATLPGGAVLSHTTVSVATTSAPNLFKTTVAGGSAGSGQPRLPLPPHTAAQVPAQPL
VIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKI
DPEEFTGRLQTELKSSPQPYLVPFLKKSLPALRQSLLNSQHLVLQGQPSQQSLQQTKLSQ
VIPQSASGSISSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQSTSA
QTVKRTPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGFGVQVSANQKNKLNDP
GGGSFRDDDDINDVASMAGVNLNEESARILATNSDLVGAQIQSCKDEPFLAAIPLHKRIL
ETAKKLGITDVPAEVVTFISHATQSRLRTVIEKVTVITQHRMESYKDDEWYEQATDVRSQ
LKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRD
ANLTALAAIGPRKKRKLDAPGLLTMGGEGVGVCGGSPAGLGTASPRQYPRQKITRVNLRD
FIFYMEQEREMSRSLLLYRALLK
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcgtcggacccactggaggagatgctgctcttctccgaggaggtggac
gagaaggcgctcagcgacctggtgggatccctggaatcgcagctggccggcggccgcggc
cccgccgagccacccccgcccaggacctccgccccgtcccagcagccgcagcaggggagc
ctggcggggggcagcagccccggccggcagcagcccggccgccccgcgccccctcccgcg
cccggggcaggggaggcggcgggacgccccggcagcgcggggagccgagcctccgcccag
gggcctctcccgtccccgtctcccccggcggcggcggcagcggcggcggggaggggagcg
agtgtaaacagtagtagtgtgcagcaatcacatggagcggctcccggcggcggcagcccc
gccgctcccgccccgccgcagcccgccgcccctgcccagcctgtcaacaaccatgtggcc
gccgcagccgccgccgctcgggacgcggggagccccggccccggccccagcccgaccgcc
gccgacggcgctccgggggccgcggggggcggcggagcggcggaagcggctgagggcgcc
gccgccgcccccgcgccgtgccccggcccggcggcgcccaacggggagggcgcgggggcc
cgggcggccgcggtgccgcccgtcggcgggcacggcggggcggccgccgcgcagccccag
cccgcgcccggtgcgctgcccgcgggcaccgcgctcggcgcctccgccagccccgcgccc
gctccgccggccccgggctcggccccgccggctcccgcggcccccgccgcgcccaagccc
gcggtcaccgccaaggcgggcgctgccctgcccgccgccccccaggccgtgtcgccgcgg
ccggcgctgggcgctgctccccggctcgtggccccgcagctgatcgtgcggccgccgccg
ccgcacgccaccatccagctgccgcccggcttcaccatcccgcccgggatggtgctggtg
cgcacggacgccgggcagctcgtgatggtgccccagcaggctctggcacaggctcagatg
caggcccaggtgcagacacagggacagggtcctgccaacgtgtcaccccggctttctgtg
cccacagctggccccgtttttcgcctctccacagctcagcagccaacgtccgtggccacc
tccagcgtccgcctgggcctcccggtgcaagccaaggtggtgccatccacggcggcgccc
gccagcgccacagccacgctgccaggaggggctgtgctctcacacaccacggtatcagta
gctacgacgagcgctccgaatttgttcaagacgacggtggcaggtggaagtgcgggctcg
gggcagccccggctgccgctgcccccgcacacggcagcgcaggtgccagcacagcccctg
gtcattcccagctctcctgtgcctggaaccaccgttgtgtcccaggaaatgcaagagaat
gtgaaaaaatgtaaaaactttttagctacccttataaagcttgcttctcataattcacca
tctccagaaacgtcccgcaatgtgaaagctctggttcaagatttgttggatgcaaagatt
gatccagaagaatttacaggccgccttcaaacagaactcaaatcatctcctcagccatat
cttgtacctttccttaagaaaagtctgcctgcactgagacaatctttactgaatagtcag
catttggttttgcaaggacagccgtctcagcagtcactccaacagaccaagctctcacaa
gttatacctcagtctgcctcgggaagcatctcctctgttgtcacgacgcagacaatagga
ataaggcaaccaaacaacatttgcacagtctctgtatcaaatacagtgcagcctcctcag
gttaaggtggtacagtcaaatcagagttctcaactgcagattatccagtcaacatctgct
caaactgtgaaacgaacccctgcttgccagactacccagattaggatgccagtggtaata
actcagaccattagaccacaaggcacagtagggaaggcaccaacaatacaagccagtaaa
agtcctgggggctttggtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccct
ggaggtggttctttcagagatgatgatgacatcaatgatgttgcctctatggctggcgtt
aatcttaatgaagaaagtgcccgaattctggctaccaactctgacttggttggagcccag
atccagtcctgtaaagatgaaccctttcttgctgctatacctctccataaacgcatactt
gaaacggctaaaaaactaggaattactgatgtgccagctgaggtggttacttttatttcc
cacgcaacacagagcagactgaggacagtgatagagaaggtgacggtgataacccagcac
cggatggagtcgtacaaagatgatgagtggtacgaacaagccacagatgtccgatcacag
ctgaagttctttgagcagttggagcgtttggaaaagcaaaggaaagatgaacaagagagg
gaaattttgctgaaggctgccaagagtcgctcaaggcaagaagacccagagcaagctaga
ctgaaacaaaaagcaaaggagatgcagcagcaggagctggcccagatgaggcagagggat
gccaacctgacggcgctggcagccatcggcccccgcaagaagcggaagctggatgctcca
ggcctgctcaccatgggaggagagggcgtgggggtgtgcgggggcagcccggccgggctg
ggcacggcctcgccccgccagtacccccggcagaaaatcacacgagtcaacctcagggac
ttcatcttctacatggaacaggagcgagaaatgagccgttccctcctgctctaccgagct
ctgcttaaataa
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