Taeniopygia guttata (zebra finch): 101234000
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Entry
101234000 CDS
T01082
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101234000 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
101234000 (NHLRC1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101234000 (NHLRC1)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101234000 (NHLRC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101234000
NCBI-ProteinID:
XP_030121410
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All DBs
Position
2:complement(68174499..68180671)
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AA seq
465 aa
AA seq
DB search
MLQDLARHRSQAERNLAKFKEGAVGTGPLRAPGGRAARALLRPRWPAGGARPPQRAPRPP
RWARGLRGRRGGSDRSPRAGMAAEDEAELSLLECRVCFEPYGPDGQRRPLNLPCGHVLCR
DCVGALAGAERRRLECPFCRRLCGPAETSDCLPLLQLLELLRPAGRGLASALGSSGGAAA
AATAGLGLRLCLGGWGSLVNPTGVAACPRSGGLAVAHDGKKRIHVFGPSGFCLRRFGERG
DASNDIKYPLDVTVTSDGHVVVTDGGDCSVKAFDSEGRGVLAVREGFCLPWGLDATPRSE
VILTDSEAGALYRLAADFQRGELKKCQMIRSQLVSPRAVAVCPTSGAVVVIEHLKARGSS
KGSTRVTIFSAEMDLIGQVDSFGLNLVFPSRIYATAVAFDREGRVIVTDVCSQAVICLGK
PDEFPIFNPLISHGLAYPVGLTYTANNSLVVLDGGDHSVKVYSST
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaagacctggccaggcacaggagccaggcagagaggaacctagcgaagttcaaa
gaaggcgcggtgggcacagggccgctccgcgctcccgggggaagggcggcccgggccctg
ctccgcccccgctggcccgcagggggcgcgcggccgcctcagcgcgctccgcgcccgccc
cgctgggcccgggggctccggggccgccgcgggggctccgatcgctctcctcgggcgggg
atggcggcggaggacgaggcggagctgagcctgctggagtgccgggtgtgcttcgagccg
tacggccccgacggacagcggcggccgctcaacctgccctgcgggcacgtcctctgccgg
gactgcgtgggggccctggccggcgccgagcgccggaggctggagtgtcccttctgccgg
cggctctgcggccccgccgagaccagcgactgcctcccgctgctgcagctgctggagctg
ctgcgccccgccggccgcggcctcgcctcggccctgggcagcagcggcggagcggcggcg
gcggccaccgcggggctcgggctgcggctgtgcctggggggctgggggtcgctggtgaac
cccaccggcgtggcggcctgccccaggtcgggtggcctggcagtggcccacgacggcaag
aagaggatccacgtcttcgggccgagcgggttctgcctgcggcggttcggggagcggggg
gacgcgagcaacgacatcaagtatccgctggatgtgacggtcacgtcggacgggcacgtg
gtggtcaccgacggcggggactgctccgtgaaggccttcgattctgagggaaggggggtc
ctggctgtccgggaaggcttctgtttgccctggggcttggatgccacccccaggagcgaa
gtaatcctgaccgactcggaagcaggcgcgctgtaccgcctggcggccgacttccaaagg
ggggaattaaagaagtgccagatgatccggtcccagcttgtcagccccagagcggtcgca
gtctgcccgacctcgggtgctgtcgtggtaatagagcacctgaaagctcggggatcgagc
aagggcagcacccgagtgacgatattcagtgcggagatggatctcatcggccaggtggac
agcttcggtctgaacctcgttttcccctccagaatatatgctacggctgtggcctttgac
agagaaggtcgtgttatagtaacggatgtttgtagccaggctgtcatatgcctagggaaa
cctgacgaatttcccatctttaatcctctaattagccacgggcttgcttatcctgttgga
ctgacttacacggcaaacaattccctcgtcgttttagacggcggtgatcattcagtgaaa
gtatatagctctacctga
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integrated database retrieval system
