Taeniopygia guttata (zebra finch): 101234041
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Entry
101234041 CDS
T01082
Symbol
USB1
Name
(RefSeq) U6 snRNA phosphodiesterase
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
101234041 (USB1)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
101234041 (USB1)
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Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
101234041
NCBI-ProteinID:
XP_032606303
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Position
11:14637900..14642389
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AA seq
382 aa
AA seq
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MSAALVEYSSSEEEQEQEQERGSRGGGAQGPPGASRPRLPVPAGLPGDPEPEEAVSDDSS
RHGGRVRGFPHERGNWATHVYLPYIAQEEFLELLELLVSRARTYVPSLAAMEEFHLSLSQ
CVVLRYHWIEPFVRSLRERLAAFHRFFCVADQVKVYTNQNKTRTFIGLEVSAGHFQLLEL
VSEVDSVLEEFDLPTFYKDPSFHISLAWCVGDLSGRLEGQCLRELQDIVDGFEESALLLR
IQWEQIRCKSGNKYFSFPLSVSAAFVASSRATSSLSCWLKKSVFVADFILVAGCAAVSTG
GSRHPMVANFAEFFKKRKKIFKSHRCLMGRRKKVAWEAATKGRMSHTVGRSTARLLGGSG
HVLSSKREGHGARSSSLSVFLL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcgctggtggagtacagcagctccgaggaggagcaggagcaggagcaggaa
cgggggagccggggcggcggcgcgcaggggccccccggggccagccgcccccgcctgccc
gtgcccgccggcctgccgggagacccggagccggaggaggccgtgagcgatgacagctcc
cggcacggcggccgcgtgcgcggcttcccccacgagcggggcaactgggccacgcacgtc
tacctgccctacattgcccaggaggaattcctggagctgctggagctgctggtgtcccgc
gcccgcacctacgtcccgtcgctggctgccatggaggagttccacctgagcctgtcgcag
tgcgtggtgctgcgctaccactggatagagcccttcgttcgctccctcagggagcgcctg
gccgccttccacaggttcttttgcgtggctgaccaagtgaaggtttacaccaaccagaac
aaaaccaggacctttattggcttggaggtctctgctgggcatttccagctgctggagctg
gtctcggaggtggacagcgttctagaggaatttgaccttcccacattctacaaggaccca
tcgttccacatcagcctggcctggtgtgtcggggacctgtctggcaggctggaagggcag
tgtctgcgggagctccaggacattgtggatgggtttgaggagtcagcactcctgctgcgg
atccaatgggagcaaatccgctgcaagtcagggaacaagtacttctccttccccttgagc
gtctctgcggcatttgtggcctcaagtcgggccacttccagtttgagctgctggctgaag
aaaagtgtgtttgtagcagatttcatcctcgttgctggatgtgctgcagtcagcacaggc
ggttccagacatcccatggtcgctaattttgctgagttttttaaaaaaagaaaaaaaatc
ttcaaaagccatagatgccttatgggaaggaggaagaaggtagcgtgggaagctgctact
aaagggagaatgtctcacacagtgggacgtagcactgccagattgttgggaggctctggg
catgttttgagtagcaagagggaaggacatggagctagatcctcttccctgagtgttttc
ctactgtaa
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