Taeniopygia guttata (zebra finch): 105758919
Help
Entry
105758919 CDS
T01082
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105758919 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
105758919 (SMARCD2)
03036 Chromosome and associated proteins [BR:
tgu03036
]
105758919 (SMARCD2)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105758919 (SMARCD2)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105758919 (SMARCD2)
PBAF complex
105758919 (SMARCD2)
GBAF(ncBAF) complex
105758919 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
105758919
NCBI-ProteinID:
XP_032599566
LinkDB
All DBs
Position
27:5247233..5255783
Genome browser
AA seq
444 aa
AA seq
DB search
MPPGGRMPMAGLQVGPPGAPPYGAATPLRPGLPQAMMDPFRKRLLTPQAQPPMATPRRGV
KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLR
IYISNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGP
DNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQT
RASIMQALWLYIKHNKLQDSHEKEFINCNRYFRQIFNCVRMRFSEIPMKLAGLLQHPDPI
IINHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESI
NQLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAV
GRHIFAKVQQRRQELEQVLGIRLT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgggggcaggatgcccatggcagggctgcaggtgggacccccgggagccccc
ccgtacggagcagcgaccccgctgcggcccggcctgccccaggccatgatggatcccttc
aggaagcgcctgctgaccccccaggcacagccgcccatggccacccccaggagaggggtg
aagaggaggaagatggctgacaaggtgctgccacagaggatccgggagctggtcccagag
tcccaggcctacatggacctcctggccttcgagcgcaagctggaccaaaccattgctcgg
aagaggatggagatccaggaggccatcaagaaacccctgacacaaaagcggaagctcagg
atttacatctccaacaccttcaccccggccaaggaggagggagaggggggagagcgtgtg
gcctcctgggagctccgtgtggaggggaaactgctggaggatcccagcaagcagaagagg
aagttctcctccttcttcaagagcctcgtgatcgagctggacaaggagctctacgggccg
gacaatcacctggtggagtggcaccggatgcccacgacccaggagaccgacggcttccag
gtgaagcgtcccggggatgtcaacgtgaagtgcaccctgctgctcatgttggaccaccag
cccccccagtacaagctggacccacggctggcccggctgctgggggtgcacacccagacc
agggctagcatcatgcaggccctgtggctctacatcaaacacaacaaactgcaggacagc
cacgagaaggagttcatcaactgcaaccgctacttccgccagatcttcaactgtgtccgc
atgcgcttctccgagatccccatgaagctggcagggctcctgcagcacccggaccccatc
atcatcaaccacaccatcagtgtggatcccaatgaccagaagaagacagcctgctatgac
atcgacgtggaggtggatgatcccctcaaagcccagatgagcaatttcctggcctccacc
accaaccagcaggaaatcgcctctctggatgccaagatccacgagaccatcgagtccatc
aaccagctgaagacacagagggatttcatgctgagcttcagcaacaacccccaggatttc
atccaggaatggatcaaatcccagaggagggacctcaagatcatcacggatgtgatcggg
aaccccgaggaggagcggcgggccgagttttaccaacagccctgggcgcaggaggccgtg
ggcagacacatctttgccaaggtgcagcagcgccggcaggaactggaacaagtgctcggg
atccgcctgacctaa
DBGET
integrated database retrieval system
