Taeniopygia guttata (zebra finch): 105758953
Help
Entry
105758953 CDS
T01082
Symbol
NCAN
Name
(RefSeq) neurocan core protein isoform X3
KO
K06794
neurocan core protein
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tgu00535
]
105758953 (NCAN)
00536 Glycosaminoglycan binding proteins [BR:
tgu00536
]
105758953 (NCAN)
04091 Lectins [BR:
tgu04091
]
105758953 (NCAN)
Proteoglycans [BR:
tgu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
105758953 (NCAN)
Glycosaminoglycan binding proteins [BR:
tgu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
105758953 (NCAN)
Lectins [BR:
tgu04091
]
C-Type lectins
Lecticans
105758953 (NCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
EGF_TEN
hEGF
Ig_3
I-set
Motif
Other DBs
NCBI-GeneID:
105758953
NCBI-ProteinID:
XP_030112530
LinkDB
All DBs
Position
28:complement(3019903..3034022)
Genome browser
AA seq
1362 aa
AA seq
DB search
MVPVMGDAACWVLLGLSLLPIAVLGSQDEGKVIRISRVQRQAVRVGLGEPAALPCLFLLR
SSSSPGPSEAPEPPRIKWSKVRSAGGRREDSPVLVAKEGAVKVAHAYEGRAWLPGYGRDR
GNATLRLRAARASDAGLYRCQVVAGIDDEQDLLPLEVTGVVFHYRPAGRRYALSFAAARR
ACRDSSAVIASPQHLQAAFEDGYDNCDAGWLSDQSVRYPITLSRPGCYGDRDRLPGVRSY
GRRDPAELYDVYCYSRELRGTVFHASGPGRFTWQGARRHCRSRGAALATAGQLHLAWRAG
LDRCDPGWLADGSVRYPIRQPRSKCGGEAPGVRTLYQFPNRTGFPPAASRFDAYCYKAAG
RGDTEQPVSPVPPTPDPPGSDNALVEHGEDPGTSGDTRDIPRDSYDLLPPPGPAGLGGDE
DEQLRQASGSPVARRGDLPGTALAPAPAAAGLGTGAATSPVPAATSRAPAATSPPPTATS
PPPTGTSPPPTGTSPPPTGTSPPPAGAASLAWPREEESLNLVDPESSRRDPPSASPARGD
PAGPPATLRSHPQGPALQLSAGSSLSPPGLGTVPSAAPESPGIPAGSASAPRRSYPGLNG
RHFPFQRQSRDPAAAAGDPAVTAAIVTRDPVQAQEVEGGAANAVELWSPPRAGSPRREGP
HASPNALEEDAGPELEAPATAPVSLPPAPRDSGTPAGTPPVPSPSPDTPRDARDHRDPPA
GGAQPRVPGARGDSPRPPADVPEEFSGFAASPEGSVPPLPPLPPAPLVAEGPELAPQPRG
DGGDGSGAPGDGALERQRKAVPFLQPEGPSEGHPASPGRAEGAPPGPRARSGPAAPHGAA
EPGRGQPEGPGDVGGGAAEPGSEAAASPPAWGVPSAPPSPAATEALLWAGTERPEELAGL
EPVAEEGSAGFAPPDPQPTQRSEPGPGAAEQLLLSPPDPRQPPATPGPPAVPGDEEDASG
EAGREEPPTPLGSAARGPWPSPSAPQPGGTEPAGSPSAGLLPEPSAEPGGPGGAPLPDTD
SGSGEEPALDERELLAWAGTGNAGGHAPPDPCRSNPCLHGGTSRANGTVCGCSCAPGFTG
ENCEIDIDDCLSSPCRNGGTCIDEVNSFVCLCLPSYGGSRCEKDTEGCEHNWHKFQGHCY
RYFSRRRSWEDAERDCRRRAGHLTSIHSQEEHAFINGFGHENTWIGLNDRIVEQDFQWTD
NTGLQYENWRENQPDNFFAGGEDCVVLVSHEIGKWNDVPCNYNLPYICKKGTVLCGPPPE
VPNAFPVGKKREKYNIHSSVRYQCREGFTQRHVPTIKCHSSGKWDRPKILCTKPRRSHRA
RRHRRHRHSHPHHQHRRHQPRKERRKHRQRLRLDWMEEGHYF
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggtccctgtgatgggggatgccgcctgctgggtcctgctcgggctctccctcctgccc
atcgccgtcctgggctcgcaggacgaggggaaggtgatccgcatcagcagggtgcagcgg
caggcggtgcgcgtggggctgggggagcccgcggccctgccctgcctcttcctcctgcgc
tcctcatcctcgccggggcccagcgaggccccggagccgccgcgcatcaaatggagcaag
gtgcgctcggccggcggccggcgggaggactcgcccgtgctggtggccaaggagggcgcg
gtgaaggtggcccacgcctacgagggccgcgcgtggctgcccggctacggccgtgaccgc
gggaacgccacgctgcggctgcgggcggcccgcgccagcgacgcggggctctaccgctgc
caggtggtggcgggcatcgacgacgagcaggacctgctgccgctggaggtgacgggcgtt
gtgttccactaccggcccgcgggccgccgctacgcgctcagcttcgccgccgcccgccgc
gcctgtcgcgacagctccgccgtcatcgcctccccccagcacctccaggccgccttcgag
gacggctacgacaactgcgacgcgggctggctcagcgaccagagtgtgcggtaccccatc
acgctgtcccggcccggctgctacggagaccgcgaccgcctccccggcgtgcgcagctac
ggccgcagggaccccgccgagctctacgacgtctactgctactcccgggagctgcgaggg
accgtgttccacgcctcggggccgggccgcttcacctggcagggcgcccggcggcactgc
cggagccgcggggccgcgctggccaccgcgggccagctgcacctggcgtggcgagcgggg
ctggaccgctgcgacccgggctggctggcggacggcagcgtgcgctaccccatccgccag
ccccgcagcaagtgcggcggagaggccccgggcgtgcggaccctctaccagttccccaac
cgcaccggcttcccccccgccgcctccagattcgacgcctactgctacaaagccgcgggg
cgcggggacacggagcagccggtgtcgccggtgccacccacgcccgacccgccgggcagc
gacaacgcgctggtggagcacggcgaggacccgggcacatcgggggacacccgcgacatc
ccccgcgacagctacgacctcctgccgccgccggggcccgcggggctgggcggggatgag
gacgagcagctgcggcaggccagcggcagcccggtggcacggcggggtgacctcccgggc
accgccctggcaccggcaccggcggctgcagggctgggcacgggcgccgcgacatccccg
gtgcccgccgcgacatcccgggcgcccgccgcgacatccccgccgcccaccgcgacatcc
ccgccgcccaccgggacatccccgccgcccaccgggacatccccgccgcccaccgggaca
tccccgccgcccgccggggccgcctcgctggcgtggccccgcgaggaggagtctctcaac
ctggtggatccggagagctcccggcgggaccctcccagcgccagcccggcccgaggggac
cctgcgggacccccggccaccctccggtcacatccccaaggcccagccctgcagctcagc
gccggctcgtccctgtcaccgcccgggctggggacggtccccagcgcggccccggagagc
cccggcatccccgcgggcagcgccagcgccccgaggaggagctaccccggcctcaacggg
cgccacttcccgttccagcggcaaagccgggaccccgcggccgcagccggggaccccgcg
gtgacagcggccattgtcacccgggaccccgtgcaggcgcaggaggtggagggaggcgca
gccaacgccgtggagctgtggagccccccccgagccggcagcccccggcgggagggtccc
cacgcgtcccccaacgcgctggaggaggacgccggccccgagctcgaggccccggccacc
gccccggtgtccctcccgccggccccgagggattcggggacccccgcggggaccccgccc
gtgccgtccccgtcccccgacactccccgcgacgctcgggaccaccgggacccacccgca
ggtggggctcagccccgcgttcccggagcccgcggggactccccgaggccgcccgcggat
gtccccgaggagttctccgggttcgccgcgtccccggagggctccgtgccgccgctgccc
ccgctgcccccggccccgctggtggccgagggtcccgagctggccccgcagccccgcggg
gacggcggcgacggcagcggggccccgggggacggcgcgctggagaggcagaggaaggcg
gtgccattcctgcagccggagggtccctccgagggacaccccgccagccccggccgcgcc
gagggggctcctcccgggccccgggcccgctccggccccgcggctccgcacggcgcggcc
gagcccggccgggggcagccggaggggcccggggatgtcggcggtggcgcggccgagccc
ggcagcgaagcagccgcgtcccccccggcctggggcgtcccctcagcgcccccttccccc
gcggccaccgaggcgctgctgtgggccggcaccgagcggccggaggagctggcggggctg
gagccggtggccgaggaggggtccgcaggcttcgcccccccagacccacagcccacccag
cgctccgagccggggccgggggcggccgagcagctcctcctgtcccccccggacccccgg
cagccccccgccacccccggccccccggctgtccccggagacgaggaggacgcctccggg
gaggccgggcgggaggagccccccacgcccctcggctcggccgcccgcgggccttggccg
tcccccagtgccccccagcccggggggacagagcccgccgggtccccgagcgcggggctg
ctcccggagccctccgccgagccggggggcccggggggggccccgctgccggataccgac
agcggcagcggggaggagccggcgctggacgagcgggagctgctggcctgggcgggcacc
ggcaacgccggcgggcacgcgccgccggacccgtgccggagcaacccgtgcctgcacggc
gggacgagccgtgccaacggcaccgtctgcggctgcagctgcgccccgggcttcaccggc
gagaactgcgagatcgacatcgacgactgcctgtccagcccgtgccggaacggcggcacc
tgcatagacgaggtcaattccttcgtgtgcctctgcctgcccagctacggcggcagccgc
tgcgagaaagacacggagggctgtgaacacaactggcacaagttccagggccactgctac
cgctacttctcccgccggcgctcctgggaggacgcggagcgcgactgccgccgccgggcc
gggcacctcaccagcatccactcgcaggaggagcacgccttcatcaacggcttcggccac
gagaacacctggatcggcctcaacgaccgcatcgtggagcaggacttccagtggaccgac
aacaccggcttgcaatacgagaactggcgggagaaccaacccgacaacttcttcgcgggc
ggcgaggactgcgtggtgctcgtgtcccacgagatcggcaagtggaacgacgtgccctgc
aactacaacctgccctacatctgcaagaaaggcacagtgctgtgcgggccccccccggag
gtgccgaacgctttcccggtggggaagaagagggagaagtacaacatccactccagcgtg
cgctaccagtgccgcgagggcttcacccagcgccacgtccccaccatcaagtgccacagc
agcggcaagtgggaccggcccaaaatcctctgcacaaaaccccggcggtcgcaccgagcg
cggcggcaccggcggcaccggcacagccacccgcaccaccagcaccgccgccaccagccc
cgcaaggagcggcggaaacaccgccagcgcctccggctggactggatggaggagggccac
tacttctag
DBGET
integrated database retrieval system
