Taeniopygia guttata (zebra finch): 105759510
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Entry
105759510 CDS
T01082
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
105759510
Cell adhesion molecules [BR:
tgu04515
]
Cadherins
Protocadherins
105759510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
105759510
NCBI-ProteinID:
XP_012431012
UniProt:
A0A674H698
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All DBs
Position
13:7543099..7546670
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AA seq
816 aa
AA seq
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MKPRKSEEPLPGRAAALILVLCVSGLTAETARYSVPEEAGRGSFVANIAKDLGLTGEELL
ARQARVVPEGEKQYLQLNQHTGDLVVREQMDREELCGQSEPCLVRFEVLLESPLQSFRAE
VRLTDINDHAPVFLNKEIVLKIPESAIPGTRFLLESAHDPDVGNNSLQHYSISSNEYFHV
YTQRRSGGGRYAELVLDRALDREQQAEVAFIITAGDGGNPPRSGTALIRVIVLDTNDNIP
VFTQSLYKVSVMENSSEDTIVVVVSASDLDAGTNGEIVYSIFQNSEENLQTFKINPETGQ
IHLKKPLDYEEKKTYEIDVQATDGGGLSTHCKVEVQVKDVNDNAPEVIITSLTSTLSEAA
PPNTVVALFNVRDRDSGDNGRTTCELTGEQPFRITLLAADAYALVTSETLDREQVEEYNV
TVRARDEGSPALSASKTLFVRLLDVNDNAPTFTQAIYTMVISENEPAGRSLGHLSATDPD
AGENAHVRYSLVPPPPGTLATASFVSVDAESGTVRSLRPLDYEKVRALEVTVRAADGGSP
PLSAQAVLRIVVRDENDNAPVLLHPGPDSSAAGELVPRWAPSGYLVAKVVAVDADAGQNA
WLSYELAKATEPGLFRVGLHSGEVRTARAVTERDAPRQRLIVLVRDRGQPSRSATATLAV
ALVDEFSDAFHQLGHDPASRLQPQIAEEEMLTTYLIASLCCVSSLFLLSVLVLTANTLCK
ARVRAELPPPSPSCYADGDFASDGVGSTGTLSPAYRYEMCLTSGSGRSEFRFLRPILPSL
HSNAEAGLDKDEELLRHSQPPCDREAQARRTVTPPF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaggaagagtgaggaaccgctcccggggcgagcggcggctctgatccttgtc
ctctgcgtctcggggttaacagcagaaaccgctcggtactctgtgcccgaagaggcgggg
agaggctcttttgtggcgaatatcgctaaggatttgggactaactggtgaggaattattg
gcccgtcaggctcgagtcgttcccgaaggagaaaaacagtatttacagctgaaccagcac
accggggatttggtggtgagagagcagatggaccgggaagagctgtgtggacagagcgag
ccctgcttggtgcgttttgaggtgctgctggagagcccactgcagtccttccgagctgag
gtaagactcaccgatataaacgatcatgctcctgtgttcctaaataaagaaattgtttta
aagatcccggaatctgcaataccggggactcggtttttgttggaaagcgctcacgatcca
gacgtggggaacaatagccttcagcattatagtatcagctcgaacgaatatttccatgtg
tacacccagcggcggagtggcggcgggaggtacgccgagctggtgttggatcgagccctg
gaccgggagcagcaggcagaagttgctttcatcatcacggctggggatggtgggaatcca
ccgcggtctggcacggctttaatccgcgtgatagtcctggatacaaacgacaacatcccg
gtatttactcagagtctgtataaagtctctgtaatggaaaacagctcagaggacaccata
gtggtggtagtgtctgctagcgatttagacgcaggaacgaatggggaaatagtgtattcc
atatttcaaaattcagaagaaaatctccaaacgtttaaaataaacccagagacaggtcag
attcatctcaaaaagcctttggattatgaagaaaaaaagacatacgagatagacgtccaa
gctacagatggagggggcctctccacgcattgcaaggtggaggtgcaggtgaaggacgtg
aatgataatgcccccgaggtgatcatcacctcgctcaccagcactctctcggaagccgcc
cctcccaacaccgtggtggccctcttcaacgtgcgggaccgggactcgggggacaatggc
aggacaacctgcgagctgacaggagagcaacccttcaggatcacgctgctggcagccgac
gcgtacgcgctggtgacatcagagacgctggaccgggagcaggtggaggaatacaacgtg
acggtgcgagctcgagacgagggctcccccgccctctcagcatccaagaccctgttcgtg
cggctcttggatgtgaacgacaatgcacccaccttcacccaggccatttacaccatggtg
attagcgaaaacgagcccgcggggaggagcctgggccacctcagtgccacggacccggat
gcgggagagaatgcccacgtaagatactcgctagtgccgccgccgccaggcaccctcgcc
acggcatcattcgtgtcagtggatgcggagagtggaaccgtccggagtttgcgcccgctg
gactacgagaaggtgcgcgccttggaggtgacagtgcgcgcagccgacggcggctccccg
ccgctcagcgcccaggccgtgctgcgcatcgtcgtgcgggacgagaacgataacgcgccc
gtgctgctgcacccgggccccgacagcagcgcggccggagagctggtgccgcgctgggca
ccctccggctacctggtggccaaggtggtggcggtggacgcggacgcggggcagaatgcg
tggctgtcgtacgagctggccaaggccacggagccggggctgttccgcgtggggctgcac
agcggcgaggtgcgcacggcgcgggccgtgacagagagggacgcgccccggcagaggctc
atcgtgctggtgcgggaccgtgggcagccgtcgcgctctgccactgccaccctcgccgtg
gcactggtggacgaattctccgacgcctttcaccagcttggccacgatcctgcgagccga
ctgcagccgcagatagccgaggaggaaatgctcaccacttacctcattgcctccctgtgc
tgcgtctcgtcccttttcctcttgtccgtcctcgtcttgacggcgaacacgctttgcaaa
gctcgtgtccgggcagagcttcctcctccctctcccagctgctacgcggatggagatttc
gccagcgacggcgtgggcagcacgggtactctgtcgccggcttaccgctacgaaatgtgt
ctgaccagcggctcggggaggagcgaattccggttcctgaggcccatcctgcccagcctt
catagcaatgctgaggcgggactggacaaggacgaggagctgctgcgccactcgcagcct
ccttgcgacagggaagcccaggcgaggagaacagtcactcctcctttttag
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