Taeniopygia guttata (zebra finch): 105759646
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Entry
105759646 CDS
T01082
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04110
Cell cycle
tgu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105759646 (SMC1A)
04114 Oocyte meiosis
105759646 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
105759646 (SMC1A)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105759646 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
105759646 (SMC1A)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105759646
NCBI-ProteinID:
XP_032605197
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Position
7:917..35325
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AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFRRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAASRAFVSMVYSEEGAEDRTFARVIVGSSSEYKINNRVVQLSEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAPEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLFHNEAEIEKLNK
ELGLKNREIDKDKKRMDRVEDELKDRKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKQYKKRKADMDELEKEMLSVEKSRQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYIATSKQSLEEQKRLEGELTEEVELAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMDSIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQFACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQGREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFERNQLREDQEKVLMWEQ
GVRKDEAEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMDEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLARGSMDDISQEEGGGTSE
DAAGSSQRSSSLYAREALIEIDYSDLPEELKDAQAEEEIRQEMAALQQRLTEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQMKKERFDRFNSCFEAVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSAANFQAIVISLKEEFYTKAQSL
IGVYPEQGDCVISKVLTFDLTKYPDTNPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctgaagctcatcgagatcgagaacttcaagtcctacaagggccgccagatc
atcgggcccttccgccgcttcaccgccatcatcggccccaatggctccggcaaatccaac
ctgatggacgccatcagcttcgtactgggggagaagacgagcaacctgcgggtgaagacg
ctgcgggacctgatccacggcgcgcccgtgggcaagcccgcggctagccgcgccttcgtc
agcatggtctactccgaggagggcgccgaggaccgcaccttcgcccgcgtcatcgtcggc
agctcctcggagtacaagatcaacaacagggtggtgcagctgagcgagtacagtgaggag
ctggagaagctgggaatcctcatcaaggccaggaacttcctcgtcttccagggagcagtg
gagtccatcgccatgaagaaccccaaggagcgcacggcgctcttcgaggagatcagccgc
tcgggggaactcgcccccgagtacgacaagcgcaagaaggagatggtgaaggctgaggag
gacacgcagttcaactaccaccgcaagaagaacatcgctgccgaacgcaaggaggccaag
caggagaaggaggaggctgaccggtaccagcggctgaaggacgaggtggttcgggcccag
gtgcagctgcagcttttcaaactgttccacaacgaggccgagatcgagaagctgaacaag
gagctgggcctgaagaaccgcgagatcgacaaggacaagaagaggatggacagggtggag
gacgagctcaaggaccgcaagaaggagctgggcaagatgatgagggagcagcagcagatc
gagaaggagatcaaggagaaggactcggagctgaaccagaagcggccacagtacatcaag
gccaaggagaacacctcacacaagatcaagaagctggaggcggcgcggaagtcactgcag
aacgcccagaagcagtacaagaaacgaaaggcagacatggacgagctggagaaggagatg
ctctccgtggagaaatcccggcaggagttcgaggagcgcatggaggaggagagccagagc
caggggagagacctcaccctggaggagaaccaggtgaagaagtaccaccggctgaaggag
gaggccagcaagcgcgcggccacgctggcccaggagctcgagaagttcaaccgcgaccaa
aaggccgaccaggaccggctggacctggaggagaggaagaaggtggagaccgaggccaag
atcaagcagaagctgcgggagatcgaggagaaccagaagcgcatcgagaagctcgaggag
tacatcgccaccagcaagcaatcgctggaggagcagaagcgcctggagggtgagctgacg
gaggaggtggagctggccaagcgccgcatcgacgagatcaacaaggagctgaaccaggtg
atggagcagctcggggacgctcgcatcgaccgccaggagagcagccggcagcagcgcaaa
gccgagatcatggacagcatcaagcgcctctaccccggctccgtgtatggccggctgatt
gacctgtgccagcccacgcagaagaagtaccagatcgccgtgaccaaggtgctgggcaag
aacatggacgccatcatcgtggactcagagaagacgggccgggattgcatccagtacatc
aaggagcagcgcggtgagcccgagaccttcctgcccctcgactacctcgaggtaaaaccc
acggacgaaaagctgcgggagctgcggggggccaagctggtgatcgatgtgatccgctac
gagccgccgcacatcaagaaggcgctgcagttcgcctgcggcaacgccctggtctgcgac
aacgtggaggacgcccgcaggattgccttcggcggccaccagaggcacaagacggtggcc
cttgacgggacgctgttccagaagtcaggcgtgatctcgggcggcgccagtgacctcaag
gccaaagcgcggcgctgggatgagaaggccgtggacaaactcaaggagaagaaggagcgg
ctgaccgaggagctcaaggagcagatgaaggccaagcgcaaggaggccgagctgcgccag
gtgcagtcccaggcccacgggctccaaatgcgcctcaaatactcccaaagtgacctggag
cagaccaagacccggcacctggccctcaacctgcaggagaagtccaagctggagagcgaa
ttggccaattttgggccgcgcatcaacgacatcaaacgaatcatccaaggccgggagcgg
gagatgaaggatttgaaggagaaaatgaaccaggtggaggatgaggttttcgaggagttc
tgccgggaaatcggcgtccggaacattcgggaattcgaggaggagaaggtgaagaggcag
aacgagattgccaagaaaaggctggagttcgagaaccagaagacgcgcctggggatccag
ctggacttcgagcgcaaccagctgcgggaggaccaggagaaggtgctgatgtgggagcag
ggcgtgcgcaaggacgaggccgagatcgagaagctcaagaaggaggaacagcggcacatg
aagatcattgacgagacgatggcacagctgcaggacctcaagaaccaacacctggccaag
aagtcggaggtgaacgacaaaaaccacgagatggacgagatccgcaagaagctgggcggg
gccaacaaggagatgacccacctgcagaaggaggtgacggccatcgagacgaagctggag
cagaagcgaagcgaccgccacaacctcctgcaggcctgcaagatgcaggacatccggctg
ccactggcacgcggctccatggacgacatcagccaggaggagggcggtggcacctcggag
gatgccgctggcagctcccagcgcagctccagcctctacgcccgcgaggctctgatcgag
atcgactacagcgacctgcccgaggagctgaaggacgctcaggcggaggaggagatccgg
caggagatggcggcgctgcagcagcggctgacggagcagcagagcgtcctgcagcgcatc
gccgcgcccaacatgaaggccatggagaagctggagagtgtccgcgacaagttccaggag
acctcggacgagttcgaggccgcccgcaagcgcgccaagaaggccaagcaggcgtttgag
cagatgaagaaggaacgcttcgaccgcttcaactcctgcttcgaggccgtggccaccaac
atcgacgagatctacaaagccctatccaggaacagcagcgcccaggcgttcctgggcccc
gagaaccccgaggagccgtacctcgatggcatcaactacaactgcgtcgcccccgggaag
cgcttccggcccatggacaacctcagcggcggtgagaaaaccgtggcggccctggcactg
ctcttcgccatccacagttacaaaccggcaccgttcttcgtgctggacgagatcgacgcc
gcgctggacaacaccaacatcggcaaggtggccaattacatcaaggagcagtcggccgcc
aatttccaggccatcgtcatctccctgaaggaggaattttacaccaaggcccagagcctg
atcggcgtctacccagagcaaggcgattgcgtcatcagcaaagttctgaccttcgacctc
accaagtacccggacaccaaccccaaccccaacgagcagtga
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