Taeniopygia guttata (zebra finch): 115490663
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Entry
115490663 CDS
T01082
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115490663 (SNF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
115490663 (SNF8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
115490663 (SNF8)
Membrane trafficking [BR:
tgu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
115490663 (SNF8)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115490663 (SNF8)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAP30
AbiEi_4
Sigma70_r1_1
Motif
Other DBs
NCBI-GeneID:
115490663
NCBI-ProteinID:
XP_032599607
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Position
27:complement(1058580..1063724)
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AA seq
282 aa
AA seq
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MHRRGVGAGAIARRKLTEAKYKERGTVLAEDQLAQMSRQLETFRTHLQAFASRHKQEIRR
SPEFRLHFQHMCAAIGVDPLASGKGFWAELLGVGDFYYELGVQIIEVCLALRHRNGGLIT
LEELQQQVLKGRGKFAQDVSADDLLRAIKKLKVLGSGFGIIPVGGTVLVQSVPAELNMDH
TVLLQLAEKKGFVTVSEIRDSLNWETERAKQALEHLLKEGMAWLGPRPIPVIPNPVIPVI
PAQEHLLKEGMAWLDAQAPAEPQFWLPALFSELHAQDGAAGP
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggcggggggtgggggcgggggcgatcgcccggaggaaactgaccgaggccaag
tacaaggagcgagggacggtcctggccgaggatcagctggcccagatgtcgcggcagctg
gagacgttccggactcacctccaggccttcgccagccgccacaagcaggagatccgccgc
agccccgagttccgcctgcacttccagcacatgtgcgccgccatcggcgtggacccgctg
gcctctggaaaaggtttctgggctgagctgctcggggtcggcgatttctactacgagctc
ggggtgcagatcatcgaggtgtgcctggcgctgcggcaccgcaacggagggctgatcacg
ctggaggagctgcagcagcaggtgctgaagggccgcgggaagttcgcgcaggacgtcagc
gcggacgatctgctccgagccatcaagaagctgaaggttctgggcagcggcttcgggatc
atcccggtgggaggaacggtcctggtgcagtcggtgcccgccgagctcaacatggaccac
acggtgctgctgcagctggccgagaaaaagggatttgtgacagtcagcgagatccgggac
agcctcaactgggagacggagcgagcgaagcaggcgctggagcacctgctgaaggagggc
atggcctggctgggtcccaggcccattcccgttattcccaatcccgttattcccgttatt
cccgcccaggagcacctgctgaaggagggcatggcctggctggacgcgcaggctccggcc
gagccgcagttctggctgcccgcgctcttctccgagctccacgcccaggacggcgccgcc
gggccctga
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