KEGG   Taeniopygia guttata (zebra finch): 115491460
Entry
115491460         CDS       T01082                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04137  Mitophagy - animal
tgu04144  Endocytosis
tgu04145  Phagosome
tgu04148  Efferocytosis
tgu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115491460 (RAB5B)
   04145 Phagosome
    115491460 (RAB5B)
   04137 Mitophagy - animal
    115491460 (RAB5B)
   04148 Efferocytosis
    115491460 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115491460 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tgu04131]
    115491460 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tgu04147]
    115491460 (RAB5B)
   04031 GTP-binding proteins [BR:tgu04031]
    115491460 (RAB5B)
Membrane trafficking [BR:tgu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    115491460 (RAB5B)
 Endosome - Lysosome transport
    115491460 (RAB5B)
Exosome [BR:tgu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115491460 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   115491460 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   115491460 (RAB5B)
  Exosomal proteins of melanoma cells
   115491460 (RAB5B)
GTP-binding proteins [BR:tgu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    115491460 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 115491460
NCBI-ProteinID: XP_030115424
UniProt: A0A674HIA5
LinkDB
Position
29:complement(884038..890360)
AA seq 213 aa
MAARGAQRPNGHSQPSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIMVYDITNQETFGRARGWVKELQR
QASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPRTEPPSSAGGRGRGVDLSQESPRGRGQCCGN
NT seq 642 nt   +upstreamnt  +downstreamnt
atggccgcccgcggtgcccagcggcccaacgggcactcgcagcccagtaagatctgccag
ttcaaactggtgctgctgggagagtcggccgtgggcaagtccagcctggtgctgcgcttc
gtcaagggccagttccacgagtaccaggagagcaccatcggcgccgccttcctgacgcag
tccgtgtgcctggacgacaccacggtcaagtttgagatctgggacacggcggggcaggag
cgctaccacagcctggcccccatgtactaccggggggctcaggctgccatcatggtctac
gacatcaccaaccaggagacgtttgggcgggcacggggctgggtgaaggagctgcagcgc
caggccagccccagcatcgtcatcgccctggccggcaacaaggccgacctggccagcaag
aggatggtggagtacgaggaagcccaggcctacgccgatgacaacagcctgctcttcatg
gagacctcggccaagacggccatgaacgtcaacgacctcttcctggccatcgccaagaag
ctccccaggacggagccaccgagctcggccgggggccggggccggggcgtggacctgagc
caggagagcccccggggccggggacagtgctgcgggaactga

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