Taeniopygia guttata (zebra finch): 115491599
Help
Entry
115491599 CDS
T01082
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115491599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
115491599
03041 Spliceosome [BR:
tgu03041
]
115491599
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115491599
Spliceosome [BR:
tgu03041
]
Complex B
Other components
Prp19-related factors
115491599
Complex C
115491599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
TPR_12
TPR_2
Suf
HAT_Syf1_M
TPR_16
TPR_15
Motif
Other DBs
NCBI-GeneID:
115491599
NCBI-ProteinID:
XP_032601762
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MLADLEESLGTFQSTRAVYERILDLRIATPQIVINYALLLEEHGRFEDSFKAYERGIALF
RWPHVGDLWLTYLSKFVARYGGRKLERARDLFEQALDGCPPQHAKTIFLLYARLEERFGL
ARRAMAVYERGTRAVPPEQQRDMFHIYIRRAAELFGVTHTRPIYQRAIEVLGDDAARELC
LRFADMECKLGEVDRARAIYTYCSQICDPRITGSFWQTWKEFEIRHGNEDTIREMLRIKR
SVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGLDEMKLLEQRAEALAAEAQRDTP
RPAQQVLFVRAEAPVGAEPPLSLQGNPEEIELDEEGEEPDDVQLEQRQVPSSVFGGLKDD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgacctggaggagagcctgggcaccttccagtcgacgcgggcggtgtacgag
cgcattctggacctgcgcatcgccaccccccagatcgtcatcaactacgcgctgctgctg
gaggagcacggccgcttcgaggacagcttcaaggcgtacgagcggggcatcgcgctgttc
cggtggccgcacgtgggggacctgtggctgacgtacctgtccaagttcgtggcccggtac
gggggccggaagctggagcgcgcccgggacctcttcgagcaggcgctggacgggtgtccc
ccacagcacgccaagaccatcttcctgctgtacgcgcggctggaggagcgcttcgggctg
gcgcgccgggccatggcggtgtacgagcgcggcacgcgggcggtgcccccggagcagcag
cgcgacatgttccacatctacatccgccgcgccgccgagctcttcggggtcacccacacg
cgccccatctaccagagagccatcgaggtgctgggtgacgacgcggcgcgggagctgtgc
ctgcgcttcgctgacatggagtgcaaactgggcgaggtggatcgggcacgcgccatctac
acctactgctcccagatctgcgacccacggatcacgggcagcttctggcagacgtggaag
gagtttgagatccgccacgggaacgaggacaccatccgggagatgctgcgcatcaagcgc
agtgttcaggccacctacaacactcaggtcaacttcatggcctcccaaatgctcaaagtg
tccggcagcgccaccggcaccgtgtcggacctggccccggggcagagcggcctggacgag
atgaagctgctggagcagcgcgcggaggcgctggcggccgaggcccagcgggacacgccc
cgccccgcccagcaggtgctgttcgtcagggccgaggcccccgtgggggctgagcccccc
ctgtccctgcaggggaaccccgaggagatcgagctggacgaggagggggaggagcccgac
gatgtgcagctggagcagcggcaggtcccctcctccgtgttcggggggctcaaggacgac
tga
DBGET
integrated database retrieval system
