KEGG   Taeniopygia guttata (zebra finch): 115491779
Entry
115491779         CDS       T01082                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115491779 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tgu01009]
    115491779 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tgu03400]
    115491779 (PNKP)
Enzymes [BR:tgu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     115491779 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     115491779 (PNKP)
Protein phosphatases and associated proteins [BR:tgu01009]
 HAD phosphatases
  Other HAD phosphatases
   115491779 (PNKP)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     115491779 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 HAD_2 Hydrolase_6 HAD DUF2249 HAD_PNKP
Other DBs
NCBI-GeneID: 115491779
NCBI-ProteinID: XP_032601880
LinkDB
Position
Unknown
AA seq 259 aa
MRAELRGLAGPVPLPDGQPVLLGRGPLTGVTDRKCSRQQVEIVANYAEGTARVTQRGVNP
SSVGGSVLARGGCGTLTPGQTLLLVNGRYPLVLHFEGTPHPKKRPASPPEEPPPARRAPQ
SPSRGGWQKLGPLLIFTPSGLRPSAKIAGFDLDGTLITTRSGKVFPTSPDDWRILYPQIP
KKLKQLQEEGYKLVVFTNQLGISRGRLRPELFQAKVEAVMQQLGVALQVLVATGPGIYRK
PVLGMWDHLCEKVGLGGDW
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcgggccgagctgcgcggcctcgccgggcccgtgccgctgcccgacgggcagcccgtg
ctgctgggccgcgggccgctcaccggcgtcaccgaccgcaagtgctcccggcagcaggtg
gagatcgtggccaactacgccgagggcacggcccgggtcacacagcgcggggtgaacccc
agctcggtggggggctcggtgctggcccgggggggctgcgggaccctcacccccgggcag
acactgctgctggtgaacgggaggtaccccctggtgctgcacttcgaggggaccccccac
cccaaaaaacgccccgccagcccccccgaggagccccccccggcccgcagagccccccaa
agcccctcccggggggggtggcagaaactgggacccctcctcatcttcaccccctcaggg
ctccggcccagcgccaagattgcggggttcgacctggacgggaccctcatcaccacccgc
tcggggaaggtgtttcccaccagccccgacgactggaggattttgtatcctcagatcccc
aagaagctgaaacagctgcaggaggaggggtataagctcgtggtgttcaccaaccagctg
ggcatctcccggggccggctgcgcccggagctgttccaggccaaggtggaggcggtgatg
cagcagctcggggtggccctgcaggtgttggtggccacggggccggggatttacaggaaa
ccagtgctgggaatgtgggaccacctgtgtgagaaggtgggactgggaggggactgg

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