Taeniopygia guttata (zebra finch): 115492686
Help
Entry
115492686 CDS
T01082
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03020
RNA polymerase
tgu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115492686 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
115492686 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
115492686 (POLR2A)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
115492686 (POLR2A)
Enzymes [BR:
tgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115492686 (POLR2A)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115492686 (POLR2A)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115492686 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
115492686
NCBI-ProteinID:
XP_032602001
LinkDB
All DBs
Position
Unknown
AA seq
1969 aa
AA seq
DB search
MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPR
QGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCSKLLVDS
NNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDLTKEKGH
GGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMDPK
FARPEWMVCTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH
VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF
SARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIR
DNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWST
FRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDT
LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHIN
CIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMG
HDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAH
NNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINI
SQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAM
GGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESV
EFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFDRMRE
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLV
IVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPD
FDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLME
AAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGM
FFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGY
SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS
YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTS
PSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS
PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP
KYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgggccgccctcgggcgacagcgcttgcccgctgcgcaccatcaaacgagtc
cagttcgggatcctgagccccgatgagatgaaacggatgtcggtgaccgaggggggcatc
aagtaccccgaaaccaccgaggggggacgccccaaactgggggggctgatggacccccgg
cagggcgtcatcgagaggacggggcgctgccagacctgcgccgggaacatgacggagtgt
ccgggccactttggccacatcgagctggccaagcccgtgttccacgtgggctttttgggc
aaaaccatgaaaatcctgcgctgcgtctgcttcttctgctccaagctgctcgtggactcg
aacaaccccaagatcaaggacatcctgggcaagtccaaggggcagcccaagaagaggctg
acccacgtctacgacctctgcaagggcaagaacatctgcgagggcggcgaggagatggac
cacaagttcggcgtggagcagcccgagggcgacgaggacctcaccaaggagaagggccac
ggcggctgcgggcgctaccagccgcgcatccggcgctcggggctggagctgtacgccgag
tggaaacacgtcaacgaggactcgcaggagaagaagatcctgctgagccccgagcgcgtg
cacgagatcttcaagcgcatctcggacgaggagtgcttcgtgctgggcatggaccccaaa
ttcgcccggcccgagtggatggtgtgcaccgtgctgcccgtgccgccgctgtccgtgcgc
ccggccgtggtcatgcagggctctgcccgaaaccaggatgacctgacccacaaactggcc
gacatcgtcaagatcaacaaccaactgcggcgcaacgagcagaacggggcggccgcgcac
gtcatcgccgaggacgtcaagctgctgcagttccacgtggccaccatggtggacaacgag
ctgcccggcctgccccgggccatgcagaagtcggggcgccccctgaagtccctgaagcag
cggctgaaggggaaggagggtcgggttcggggcaacctcatgggcaaacgcgtggatttc
tccgcccgcaccgtcatcacccccgaccccaacctggccatcgaccaggtgggcgtcccg
cgctccatcgccgccaacatgaccttcgccgagatcgtcacgcccttcaacatcgacagg
ctgcaggagctggtgcgcagggggaacagtcagtaccccggggccaagtacatcatccgg
gacaacggggacaggatcgacctccgcttccaccccaagcccagcgacctccacctgcag
atcggctacaaggtggagcgtcacatgtgcgacggggacatcgtcatcttcaaccggcag
cccaccctgcacaagatgtccatgatgggtcaccgggtcaggatcctgccctggtccacc
ttcaggctgaatctgagcgtcaccacgccctacaacgccgactttgacggcgatgagatg
aacctgcacctgccgcagtcgctggagacgcgggcggagatccaggagctggccatggtg
cccaggatgatcgtcaccccccagagcaaccggcccgtcatgggcatcgtgcaggacacg
ctgacggccgtgcgcaagttcaccaagagggacgtcttcctcgagaggggcgaggtgatg
aacctgctgatgttcctgtccacgtgggacggcaaggtgccccagccggccatcctgaag
ccgcggccgctgtggacagggaagcagatcttctccctcatcatccccggccacatcaac
tgcatccgcacgcacagcacccaccccgacgacgaggacagcggcccctacaagcacatc
tcccccggggacaccaaggtgatcgtggagaacggggagctcatcatgggcatcctgtgc
aagaagtccctggggacgtcggccgggtccctggtgcacatctcctacctggagatgggc
cacgacaccacgcgcctcttctacagcaacatccagaccgtcatcaacaactggctgctc
atcgagggtcacaccatcggcattggggactccatcgccgacgccaagacctaccaggac
atccagaacaccatcaagaaggccaagcaggacgtcatcgaggtgatcgagaaggcccac
aacaacgagctggagcccaccccgggcaacaccttgcgccagacctttgagaaccaggtg
aaccggatcctcaacgacgcccgggacaagaccggctcttctgcccagaagtccctgtcc
gagtacaacaacttcaagtccatggtggtctcgggggccaagggctccaagatcaacatc
tcccaggtgatcgcggtggtggggcagcagaacgtggaggggaagcggatcccgttcggc
ttcaagcaccggacgctgccgcacttcatcaaggacgactacggccccgagagccgcggc
ttcgtggagaactcctacctggccggcctcacccccaccgagttcttcttccacgccatg
ggcggccgcgagggcctcatcgacacggccgtcaaaacggccgagaccgggtacatccag
cggcggctgatcaagtccatggagtcggtgatggtcaagtacgacgccacggtcaggaac
tccatcaaccaggtggtgcagctgcgctacggcgaggacgggctggccggcgagagcgtc
gagttccagaacctggccaccctcaaaccctccaacaaggccttcgagaagaagttcaag
ttcgactacaccaacgagcgggcgctgcgccggacgctgcaggaggagctggtcaaggac
atcctgtccaacgcccacatccagaacgagctggagcgcgagttcgaccgcatgcgcgag
gacagggaggtcctcagggtcatcttccccaccggggacagcaaggtggtgctcccctgt
aacctgctccgcatgatctggaacgcgcagaagatcttccacatcaactcccggctgccc
tcggacctgcacccggtcaaggtggtggagggggtgaaggagctgagccggaagctggtg
atcgtcaacggggaggacccgctgagccggcaggcgcaggagaacgcgacgctgctcttc
aacatccacctgcgctccaccctctgcagccgccgcatggtggaggagttccggctcagc
ggggaggccttcgactggctgctgggcgagatcgagtccaagttcaaccaggccatcgcc
caccccggggagatggtgggcgctctggccgcgcagtccctgggtgaaccggccacgcag
atgaccctcaacacgttccactacgcgggggtgtcggccaagaacgtcaccctgggcgtg
ccgcgcctcaaggagctcatcaacatctccaagaagcccaagacgccgtcgctcaccgtg
ttcctgctgggccagagcgcccgcgacgccgagcgcgccaaggacatcctgtgccgcctg
gagcacaccacgctgcgcaaggtgacggccaacaccgccatctactacgaccccaaccct
cagagcacggtggtggccgaggaccaggagtgggtcaacgtctactacgagatgcccgac
ttcgacgtcagccgcatctcgccgtggctgctgcgcgtcgagctcgaccgcaagcacatg
accgaccgcaagctcaccatggagcagatcgccgagaagatcaacgccggctttggtgac
gacctcaactgcatcttcaacgacgacaacgccgagaagctggtgctgcgcatccgcatc
atgaacagcgacgagaacaagatgcaggaggaggaggaggtggtggacaagatggacgac
gacgtcttcctgcgctgcatcgagtccaacatgctgacggacatgaccctgcagggcatc
gagcagatcagcaaggtgtacatgcacctgccgcagacggacaacaagaagaagatcatc
atcaccgaggacggggagttcaaggctctccaggagtggatcctggagaccgacggcgtc
agcctcatgcgggtgctgagcgagaaggacgtggaccccgtgcgcaccacctccaacgac
atcgtggagatcttcaccgtgctggggatcgaggcggtgcggaaggcgctggagcgggag
ctgtaccacgtcatctccttcgacggctcctacgtcaactaccggcacctggcgctgctg
tgcgacaccatgacctcgcgcggacacctgatggccatcacccggcacggcgtcaaccgg
caggacaccgggcccctgatgaagtgctccttcgaggagacggtggacgtcctgatggag
gcggctgcccacggggagagcgaccccatgaagggcgtgtccgagaacatcatgctgggc
cagctggccccggccggcaccggctgcttcgacctcctgctggacgccgagaagtgcaag
cacggcatggagatccccagcgccctgcccggcctcggcgtgggcggccccaccgggatg
ttcttcggctcggcccccagccccatgggggggatgtccccggccatgaccccctggaac
cagggcgccaccccggcctacggcgcctggtcccccagcgtgggcagcgggatgaccccg
ggcggggccgggttctcccccagcgccgcctcggacgcctccggcttcagccccggctac
tccccggcctggtcacccacacccggctcgccggggtcccccggcccctccagcccctac
atcccctcccccggtggcgccatgtcccccagctacagcccgacgtcccccgcctacgag
ccgcggtcgccggggggctacaccccacagagccccagctacagccccacctctcccagt
tacagccccacgtcccccagctacagccccacctcgcccaactacagccccacctcaccc
agctacagccccacctctccaagctacagcccgacctcccccagttacagccccacttcc
cccagttacagcccgacctccccgagctacagccccacctcccccagttacagccccacc
tcgcccagctacagccccacctcgcccagctacagcccgacgtctcccagctacagcccc
acctcccccagttacagccccacctcaccgagctacagccccacctctcccagttacagc
cccacttctcccagttacagcccgacctcgcccagttacagccccacctcgcccagctac
agccccacctcacccaactacagccccaccagccccaactacaccccgacctctcccagt
tacagccccacctctcccagttacagccccaccagccccaactacaccccgacctcgccc
aactacagccccacctcgcccagctacagccccacttcccccagttacagccccacctcc
cccagttactccccgtccagcccccgctacaccccacagtcgcccacctacacccccagc
agccccagctacagccccagcagccccagctacagccccacgtcccccaagtacaccccg
accagccccagctacagccccagctcccccgagtacaccccgacctcgcccaagtacagc
cccacctcccccaagtacagccccacctcgcccaagtacagccccacctcacccacctac
agccccaccacgcccaagtacagccccacctcgcccacctacagccccacctcgcccgtc
tacaccccgacgtcgcccaagtacagccccacctcgcccacctacagccccacctcgccc
aagtacagccccacctcgcccacctacagccccacctcgcccaagggctccacctacagc
cccacgtcccccggctacagccccacctcgcccacctacagcctcaccagcccggccatc
agccccgacgacagcgacgacgacaactga
DBGET
integrated database retrieval system
