Taeniopygia guttata (zebra finch): 115493194
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Entry
115493194 CDS
T01082
Symbol
LRFN1
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
115493194 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
115493194 (LRFN1)
Cell adhesion molecules [BR:
tgu04515
]
Immunoglobulin superfamily
SALM family
115493194 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115493194 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
ig
fn3
Ig_2
LRR_4
Ig_DSCAM-DSCAML_C
LRRCT
Fndc10
DUF2866
LRR_9
Motif
Other DBs
NCBI-GeneID:
115493194
NCBI-ProteinID:
XP_032601969
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
GLASLRHLILANNQLAAIDAAAFAAFAATVEDLDLSHNNLPALPWDAVAAMGSLATLTLD
QNCWERVPAGAVARLPRLARLDLTANRLRALPPVPGPPGPALAAGGNPLHCNCELLWLRR
VAQPGRLETCATPAPLAGRLLGAVPEEELTCRAPAVTAAAAHPPAVTEGQPLRLGCAAVG
DPPPALHWLGPDGRVVQNGSRRSVGADGSLELRVATLRDHGGFTCVAANAAGEAAARVDV
VVVPLPVPRGRDGDGEAAAAEPGPGPSDMAQAGGNDTWGGPGERRVVAAEVTGSSARIRW
LPQRHVPGVRMVQIQYNSSADDALVYRLLPPSSRTFVLRDLAPGRQYELCVSALRVVGDP
PAAPRPLGCVSFATAAAPPGCAAPPRPHFLGGTVIIVIGAAIAASVLVFILILTARWKAA
AGARRPPPALTSVCSQTNGGPRPAETPELPPLPPLPPAAAGGARGLFPSHSYPRRARPRR
HGSLPRLDAPEGSPLGPPLRPSFGSTHWMLESTV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gggctggccagcctgcgccacctcatcctggccaacaaccagctggccgccatcgacgcc
gccgccttcgccgccttcgccgccaccgtggaggacctggacctgtcgcacaacaacctg
ccggccctgccctgggacgccgtggccgccatgggcagcctggccacgctgaccctggac
caaaactgctgggagcgggtgccggccggcgccgtggcgcggctgccgcgcctggcccgg
ctggacctgacggccaaccggctgcgggcgctgccgccggtgccggggccgccggggccg
gcgctggcggccggggggaacccgttgcactgcaactgcgaattgctgtggctgcgccgc
gtggctcagccgggccgcctggagacctgcgccacgccggcgccgctggccgggcggctg
ctgggcgccgtgcccgaggaggagctgacctgccgggcccccgccgtcaccgccgcggcc
gcgcacccgcccgcggtcaccgaggggcagccgctgcgcctgggctgcgccgccgtcggg
gacccgccgcccgcgctgcactggctgggccccgacgggcgcgtggtgcagaacggctcc
cggcgctcggtgggcgccgacggctccctggagctccgcgtggccaccctgagggaccac
ggcggcttcacctgcgtggccgccaacgccgcgggcgaggcggccgcgcgcgtcgatgtc
gtggtggtgccgctgccggtgccgcggggacgggacggggacggggaggccgcggccgcg
gagccggggccgggaccctcggatatggcccaagcgggcggcaatgacacctgggggggg
cccggggagcggcgggtggtggcggcggaggtgacggggtcctcggcgcgcatccggtgg
ctgccgcagcgccacgtgcccggcgtgcgcatggtgcagatccagtacaacagctcggcc
gacgatgccctggtctacaggttgttgcccccctccagccgcaccttcgtgctgcgggac
ctggccccgggccgccagtacgagctctgcgtgtccgcgctccgcgtggtcggggacccc
cccgccgccccccgcccgctcggctgcgtctccttcgccacggccgccgctccgccgggc
tgcgccgcgccgccgcggccccacttcttggggggcaccgtcatcatcgtcatcggcgcc
gccatcgccgcctccgtgctcgtcttcatcctcatcctcacggcgcgctggaaggcggcg
gcgggggcgcggcgccccccgcccgccctcaccagcgtctgctcccaaaccaacggcggc
ccccggcccgccgagacccccgagctgcccccgctgccccctctgcccccggcggcggcc
gggggggcgcgggggctgttccccagccacagctacccccggcgggcgcggccgcggcgc
cacgggtccctgccgcggctggacgcgcccgaggggagccccctgggaccccccctgcgc
ccctccttcggcagcacccactggatgctggagagcaccgtgtga
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