Taeniopygia guttata (zebra finch): 115494890
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Entry
115494890 CDS
T01082
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
115494890
Cell adhesion molecules [BR:
tgu04515
]
Cadherins
Cadherin related
115494890
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
115494890
NCBI-ProteinID:
XP_032603874
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Position
4:42048736..42050819
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AA seq
656 aa
AA seq
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MARRLRAGRCRGGQGGAPSTGRALALLLPLWLCAAGGSAAPVYNLSLAVDEGLPAETLVG
DIRAGLPPGADPPGGFLLSEGSGESAVLADFHVQPETGIIRTARRLDRERRARYSFAAAT
LRGEVVQVEIAVTDVNDHSPRFPKDSLQLNISELSPPGTAFRLPAARDPDAGSFGTQGYA
LLEEGGAAGEPPLFQLRYVRPEPLELVLLRRLDRERADVHRLVVEAWDGGSPRRRGRLRV
SVRVLDENDNAPAFSRGEYRARLREDAPPGTAVCRLRATDPDLGANGEVRYAINRRQSDP
DGYFAVEERSGVLRLRRPLDREARALHRLVVEARDGGAQPEVSSVLVSVAVLDVNDNRPS
IRLLYLTETGGPRVSEGARPGDYVARVSVSDADESGDEEGAEGDGIALALLGGDDAFALR
AAGAGVFFLCVAGPLDRESRDLYELRLVATDGGTPPLSAEEPLLLRVADLNDETPAFPQP
HYRAAVSEAASPGTAVLRLSASDADEPGSPNAEVRYALEGDAAALALLRIDARSGAVSTR
ARLDRERQAALELRVVARDGGVPPRAAACRLSVRVEDANDNEPRFARAVYRARLPEHAAR
GRRLLQVSPARPSTVRPPHGPARPRGRCPGTLLSPLAPPPRSSAAGRQGARQVERR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcggctgcgggccggcaggtgccgcggcgggcagggcggcgctccctcgacg
ggacgggcgctggcgctgctgctgccgctgtggctgtgcgcggcgggcggcagcgcggcg
ccggtgtataacctcagcctggcagtggacgaggggctgccggccgagacgctggtgggc
gacatccgtgcggggctgccaccgggcgcggatccgcccgggggcttcttgctgtcggag
gggagcggcgagtcggcggtgctggcggacttccacgtccagccggagacgggcatcatc
cgcacggcgcggcggctcgaccgggagcggcgggcgcgctacagcttcgcggcggccacg
ctgcgcggcgaggtggtgcaggtggagatcgctgtcaccgacgtgaacgaccactcgcca
cgcttcccgaaggacagtctgcagctcaacatctccgagctcagcccgcccggcaccgct
ttccgcctgccggctgcccgcgaccccgacgccggcagcttcggcacgcagggctacgcg
ctgctggaggagggcggcgcggcgggggagccgccgctcttccagctgcgctatgtgcgg
ccggagccgctggagctggtgctgctgcggcggctggaccgcgaacgggcggacgtccac
cggctggtggtggaggcgtgggacggaggcagcccgcggcgacgcggccgcctgcgggtg
tcggtgcgggtgctggacgagaacgacaacgcgcccgcattcagccgcggcgagtaccgg
gcgcggctgcgggaggacgcgccgccgggcaccgccgtctgccgcctgcgggccaccgac
cccgacctgggtgccaacggcgaggtgcggtacgccatcaatcgccggcagagcgacccc
gacggctacttcgcggtggaggagcgcagcggcgtcctgcgcctccgccgcccgctggac
cgcgaggcgcgggccctgcaccgcctggtcgtggaagcgcgggacggcggcgcccagccc
gaggtctccagcgtcctcgtctccgtggccgtgctggacgtgaacgacaaccggccctcc
atccgtctgctctacctcaccgagaccggcggtccgcgcgtctccgaaggggcgcgtccc
ggcgactacgtggcccgagtctccgtctcggacgccgacgagagcggcgacgaggaaggt
gcggagggcgacggcatcgcgctggccctgctgggcggcgacgacgccttcgcgttgcgg
gcggccggggccggcgtcttcttcctctgcgtggcggggccgctggaccgagagagccgc
gacctgtacgagctgcggctggtggccacggacggcggcacgccgccgctctccgccgag
gagccgctgctgctgcgcgtcgccgacctcaacgacgagacgcccgcgttcccgcagccc
cactaccgcgccgccgtctcggaggccgcctcccccggcacggccgtgctccgcctcagc
gcctcggacgccgacgagccgggctcgcccaacgccgaggtgcggtacgcgctggagggc
gacgcggccgccctggccctgctgcgcatcgacgcgcggagcggcgccgtcagcacgcgc
gcgcgcctggaccgggagcggcaggcggcgctggagctgcgcgtggtggcgcgggacggc
ggcgtcccgccgcgcgccgccgcgtgccgcctcagcgtgcgcgtggaggacgccaacgac
aacgagccgcgcttcgcgcgcgccgtgtaccgcgcgcgcctgcccgagcacgccgcgcgc
ggccgccgcctcctccaggtgagccccgcacggcccagcacggtccggccccctcacggc
cccgcacggccccgcggccgctgccctggcacgctgctgagccccctggcaccgccgccg
cgctccagcgctgccgggaggcagggggcgcggcaggtggagcgccgttaa
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