Taeniopygia guttata (zebra finch): 115495028
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Entry
115495028 CDS
T01082
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
115495028
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115495028
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115495028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf_RING_Vps8
zf-C3HC4_3
zf-RING_4
zf-rbx1
Zn_ribbon_LapB
Motif
Other DBs
NCBI-GeneID:
115495028
NCBI-ProteinID:
XP_032604065
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All DBs
Position
4:complement(47377609..47386453)
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AA seq
357 aa
AA seq
DB search
MSSRQRKRPGGAVDSRPARKRSRLLPSSAGGTSQMEPIDLEESGTPAFEPAAGEVIDLTG
VSSEPEVITISDDESPVDRQQSQQQPHLSRVSENSAEPLARNDEEEPGEDDGAWPAGPSG
PPVREGDNSQVQDKGQSQQHSLGPSDTENSAELRASDSEEEPSDNDDAWMTCLLSPSTCE
DDNAENQQDPLDSRAAENAAEVLADENEEEPQDIERPSASLLCVICMSCYSQLLEVYQQQ
RRRATLNSQEQVDASGNGTGANDAPVADSAPAEQGAAEEGAALSDSVSSSAQQGGVIRCP
ICMDSYSEIMQSGRLIVTTLCGHVFCSECLPVALEILGRCPTCRMDLTPDLYHPIYI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacgtcagcgaaagcgccctggaggagcagttgattccagaccagctcggaaa
cggagccggctgctgccctccagcgcaggtggaacttcgcagatggagccaatagacctg
gaggaaagtggcacacctgcttttgagcctgctgctggagaagtcatagatctcacaggt
gtctcttctgagcctgaagtcatcactatcagtgatgatgagtctcctgtggacaggcag
cagagccagcagcagccacatctttccagagtgtcagagaattcagccgagccactggca
aggaacgatgaagaggaacctggagaagatgatggtgcatggccagcaggtccttctggt
cctccagtgagggagggtgacaactcacaggtgcaggacaaggggcagagccagcagcac
tcacttggccccagcgacaccgagaattcagctgagcttcgggcaagtgacagtgaagag
gaaccaagtgataatgatgatgcatggatgacatgtctcctgagtccttcaacttgtgag
gatgacaatgcagagaaccagcaagacccacttgattccagagcagcagagaatgcagct
gaagtactggcagatgagaatgaagaggaaccacaagatattgaaaggccctctgctagt
ctcctctgcgtgatttgcatgagttgttactcacagcttcttgaagtttatcaacaacaa
aggagaagggccaccctgaacagccaggaacaggtggatgcctctggtaatggaacagga
gctaatgatgcacctgtggctgactcagcccctgcagaacagggagcagcagaggaggga
gctgcactttcagattctgtttcctccagtgcacagcaaggaggtgtcattaggtgtcca
atttgcatggattcttactcagagattatgcaaagtggacgactgattgtgacaaccctg
tgtggccatgtcttctgcagcgagtgcctccctgttgccctggagattctcggcaggtgc
ccaacctgcagaatggacctcactccagacctataccatcccatttatatatga
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