Taeniopygia guttata (zebra finch): 115495553
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Entry
115495553 CDS
T01082
Symbol
FOXA1
Name
(RefSeq) hepatocyte nuclear factor 3-alpha
KO
K09387
forkhead box protein A1, hepatocyte nuclear factor 3-alpha
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
115495553 (FOXA1)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix tissue-specific regulators
115495553 (FOXA1)
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
HNF_C
Forkhead_N
Motif
Other DBs
NCBI-GeneID:
115495553
NCBI-ProteinID:
XP_030130540
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Position
5:complement(38149880..38155247)
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AA seq
444 aa
AA seq
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MLGTVKMEGHETSDWNSYYADTQEAYSSVPVSNMNSGLGSMNTMNTYMTMNTMTTSGNMT
SSSFNMSYANTGLGAGLSPGAVAGMPAGSAGPVNGMPAGVAAMGTALSPGGINAMSAQPA
PMNGLSPYGSMNPCMSPMAYTQSNLGRTRDAKSFKRTYPHAKPPYSYISLITMAIQQAPS
KMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHP
DSGNMFENGCYLRRQKRFKCEKPANSKATQEGRKDQAGASNSSSNSPLHRGHNKPAQLDT
ATSLSSSNPSTSPQSMDHSGSSTELKTSASAASSTISSVPTLASVPHPPHSLAHEPQLHL
KGDPHYSFNHPFSINNLMSSSEQQHKLDFKAYEQALQYSSYGASIPGGLPLGSASMAGRS
SIEPSALEPSYYQGVYSRPVLNTS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgttagggactgtgaaaatggaagggcatgaaaccagcgactggaacagctactacgcc
gacactcaggaggcctattcctcggtgcccgtgagcaacatgaactcggggctgggctcc
atgaacaccatgaacacctacatgaccatgaacaccatgacgacaagcggcaacatgacc
tccagctccttcaacatgtcctacgccaacacggggctgggggctgggctgagtcccggc
gccgtggccggcatgccggcaggctcggcggggcccgtgaacggcatgccggccggcgta
gccgccatgggcacggcgctgagccccggtggcatcaatgccatgtctgcccagccggcc
cccatgaacgggctgagcccctacggcagcatgaacccctgcatgagccccatggcctac
acccagtccaacctcggcaggacacgggacgctaagtccttcaagcggacttacccccac
gccaagccgccctactcctacatctccctcatcaccatggccatccagcaggcacccagc
aagatgctgacgctgagtgagatctaccagtggatcatggaccttttcccctactaccga
cagaaccagcagcgctggcagaacagcatccgccactcgctctctttcaatgactgtttt
gtcaaggtggcccggtcccccgacaagcccggcaagggctcctactggaccctgcacccc
gactccggcaatatgtttgaaaacggctgttacctccgccggcaaaagcgcttcaagtgc
gagaagccggcgaacagtaaagccactcaggagggcaggaaagatcaggccggggcctct
aattcaagctccaactcccccctgcacagaggccacaacaaacctgcacagctggataca
gccacctctctctccagctccaacccgtccaccagccctcagtctatggaccacagtgga
tcaagcacggagctaaagacctcggcctcggccgcctcctccaccatcagctctgtacca
actttggcctccgtcccacacccccctcactcattagcccacgaaccccagctccacctc
aagggtgatccccactactccttcaaccacccgttttccatcaacaacctcatgtcctcc
tcggagcagcagcacaagctggacttcaaagcctacgagcaggcgctgcaatattcctcc
tacggggccagcatccccggcgggctgccccttggcagcgcctccatggctggccggagc
agcatcgagccctcggccctagagccctcctactaccaaggtgtgtattccagacccgtg
ctaaacacctcctag
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