Taeniopygia guttata (zebra finch): 115497044
Help
Entry
115497044 CDS
T01082
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
115497044
Cell adhesion molecules [BR:
tgu04515
]
Cadherins
Protocadherins
115497044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
115497044
NCBI-ProteinID:
XP_030139511
LinkDB
All DBs
Position
13:7546848..7550915
Genome browser
AA seq
813 aa
AA seq
DB search
MALARQVLCLSAFLSLPLARAEPIRYSVAEEAESGSLVGKLAEDAGLTPAQLSARRARLV
SEDGRQHFRFERASGRLVVAGRLDREELCGQAATCMLPFELLLSSPLQFFRVEVTLDDIN
DHSPVFREDRVYFSIPEKSDPGSLFPMEAAQDLDIGSNTVQEYSIFPQNEYFSVSYGSRS
TGDKYVELVLEKPLDREEHAEMGFTVIAVDGGSPPRSGTIEISIIILDVNDNVPTFTQER
YIGKVLENTPEGSVVLTVQATDQDAGVNGVISYQLNQAVGQSDSAFLIDPITGEIKITKP
LDFEAAETHELIVRATDGGGLSSICKVLVEVVDVNDNAPELVVSSFSSPIPENTVPGTVV
ALFSVRDRDSGANGKISCALEDQLSFSLWPAYKNYYELVTVSMLDREETPQYILSVTAAD
AGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAGDADVGLNAK
VTYSLAPEQGAERPSCSCISVNSENGHVFVLRPLDYEHLRQTEVTVSASDAGSPPLRANV
TVRLVVLDENDNAPLVLYPAQDGSPASSELVPVWAEAGYLIGKVVAVDADSGQNSWLSYH
LLRATDPGLFSVAVQSGEVRLRRPVTERDSVKQKLVVLVRDNGKPPLSATAALSALLLKD
FSDVRLPHSSPAPEDQDGSLTTYLIISLVFVSLLFLISSAVFVARKACRRKELEAGHVLY
GADNLQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFKFLRPILPSLPPQHCALGQGPDE
EQDFPCVPVSTEDTAPDNAGTLSAGQFNALSFD
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcaaggcaagtgctttgtctctctgctttcctctcgctgccgctcgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtgggcaag
ctggcggaggacgcggggctgacgccggcgcagctctcggctcgccgcgcccgcctggtc
tcggaggacggccggcagcattttcgcttcgagcgcgcctccggccgcctcgtcgtggcg
gggaggctggaccgggaggagctgtgcggccaggccgccacctgcatgctccccttcgag
ctgctgctctccagccccctgcagttctttcgggtcgaggtgactctggacgatatcaat
gaccattctcctgtgttccgagaagatcgagtctattttagcatccctgaaaagagcgac
ccgggttcacttttcccaatggaggctgctcaggacctggatataggcagcaacacagtc
caggagtacagcatctttccccagaacgagtatttcagtgtctcttatggaagtcggagt
actggtgacaaatatgttgaacttgttctggagaagccactagacagagaggaacatgca
gagatgggtttcactgttattgccgtggatgggggttctcctcccagaagtgggactatt
gagatctctattatcattctagatgtaaatgacaatgttcccaccttcacgcaagagcgc
tacattggaaaggtgttggagaacacgccagaaggctctgtggttctgactgtgcaggca
actgatcaggatgcaggagttaatggggtcatttcctatcaactcaaccaggcagtgggc
cagagtgactcagcatttttgattgatcccataactggtgaaattaaaatcaccaaacct
ctggattttgaggcagcagaaactcacgagctgattgtgagggctacagacggtgggggc
ctctcatccatctgcaaagtgttggtggaggtggtggatgtgaacgacaatgccccagag
ctggtggtcagttccttcagcagtcccatccccgagaacacagtgcccggcacggtggtt
gccctgttctcggtgagggaccgggattctggtgccaacgggaagatctcctgtgccctc
gaggatcagctctccttctccctgtggccagcctataagaattactatgagctggtgaca
gtgagcatgctggaccgcgaggagacgcctcagtacatcctgagtgtcacggcagcagat
gcggggtcgcctcctctcacaagcacccagaccttcaccgtggacatctccgatgtcaat
gacaatgcccccgtcttcaaccagacctcctacaccatgtacgtgcgtgagaacaacgtc
cccacggtgtttgttggggccgtcagtgctggggatgctgacgtggggctcaatgccaag
gtgacctattccctggcaccagagcaaggggcagagcggccctcgtgctcctgcatctcg
gtgaactctgagaacggacacgtgtttgtgctgcggcccctggactacgagcacttgagg
cagacggaggtgacggtcagtgcctctgacgcgggctctcctcccctcagagccaatgtc
accgtccgcctggtcgtgctggacgagaatgacaacgctccgctcgtgctctacccggcc
caggacggcagcccagcgtccagcgagctggtgcctgtgtgggctgaggcgggctacctc
atcggcaaagtggtggccgtcgatgccgactcgggacagaactcctggctctcctaccac
ctgctgagggccaccgacccagggctgttttcggtggctgtccaaagcggggaggtgcgt
ctgaggaggccggtgacagagagagacagcgtgaagcagaagctggttgtcctggtcaga
gacaacggcaagcccccactgtcagccacggcagccctgagcgctctcctgctcaaggac
ttctcagacgtgcgcctcccgcacagcagcccggccccagaggatcaggacggctccctg
accacctatttaatcatttccttggtctttgtctcactgctcttcctcatctccagcgca
gtctttgtggctcgcaaggcgtgcaggagaaaggagctggaggctggccatgtgctctat
ggtgccgacaacttgcagagcggcctggccgatgcagccgctgcagggaccctgccccgc
gcctattgctacgagatcagcctcacaacgggctcgggcaacagcgagttcaaattcctc
aggcccatcctgcccagcctgcccccacagcactgcgccctgggccagggccccgatgag
gaacaggatttcccctgtgtccctgtcagcacagaggacacagccccagacaatgctggg
actctctctgcaggacagttcaacgctctttcctttgactaa
DBGET
integrated database retrieval system
