Taeniopygia guttata (zebra finch): 115497963
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Entry
115497963 CDS
T01082
Symbol
SOX12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
115497963 (SOX12)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115497963 (SOX12)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115497963
NCBI-ProteinID:
XP_030144847
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Position
20:7890122..7894346
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AA seq
299 aa
AA seq
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MVQRGPRGRGAEARREPCAPLPARDTEPAWCKTPSGHIKRPMNAFMVWSQHERRKIMDQW
PDMHNAEISKRLGRRWQLLHDSEKIPFVREAERLRLKHMADYPDYKYRPRKKGKVGTGAA
RPRLPVKIKPSVLGRVSASRRQPAKLPTGPDTPQEPAPEVPAEDSPVVPGTAAWNPASNG
ESSPQEPPAPLSPTTPCPEPGRSPESGSPSPMSAGSPPSSFSSSDEELEEELLGIMPGRA
PASATCGALDWSVFDKDHDLYPRGGSSHFEFPDYCTPEVTEMIAGDWLMSSISDLVFTY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcgcggcccgcggggccggggcgcggaggctcggcgggagccctgcgccccg
ctgcccgcccgtgacaccgagcccgcctggtgcaagacgccgagcgggcacatcaagcgg
cccatgaacgccttcatggtgtggtcccagcacgaacgccgcaagatcatggaccagtgg
cccgacatgcacaacgccgagatctccaagcgcctgggccggcgctggcagctcctgcac
gactccgagaagatcccctttgtcagggaggccgagcgcctgcgcctcaagcacatggct
gactaccccgactacaagtaccggcctcggaaaaagggcaaggtgggcaccggagcagcc
cgcccgcggctcccagtgaagatcaagccctccgtgttgggccgtgtctctgccagccgc
aggcagcccgccaagctgcccaccggccccgacaccccgcaggagcccgcaccagaggtg
cccgctgaggacagccctgtggtgcctggcacggctgcctggaacccggcatccaacggg
gagagcagcccccaggagccccctgcacccctgagccctaccacaccctgcccggagcca
gggaggtccccagagagcggctccccctctcccatgtcggctgggtcccctccctcttcc
ttcagctcctctgacgaggagctggaggaggagctgctggggatcatgcccgggcgggca
cctgccagtgccacctgtggtgccctggactggtccgtcttcgacaaggaccacgacctc
tacccgcggggaggctcctcgcacttcgagttcccggactattgcacgcccgaggtgacg
gagatgatagcgggggactggctcatgtccagcatctcagacttggtctttacctactga
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