Taeniopygia guttata (zebra finch): 115498067
Help
Entry
115498067 CDS
T01082
Symbol
CROCC
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tgu03037
]
115498067 (CROCC)
Cilium and associated proteins [BR:
tgu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115498067 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Cytadhesin_P30
Rota_NSP3
Motif
Other DBs
NCBI-GeneID:
115498067
NCBI-ProteinID:
XP_032608042
LinkDB
All DBs
Position
21:5669199..5700680
Genome browser
AA seq
1922 aa
AA seq
DB search
MASLLSLQEENRILQQELSRVEDLLAQSRAERDELAIKYNALSERLEQSLRLEPEEGAES
RSLAQHNIELRRLLEEEQAAYKRKLQAYQEGQQRQAQLVQKLQAKVLQYKKKCGEVEQQL
LEKATELEQERLTIQLDASGSQHDEESSNELENALIRLEEEQQRSSSLVQVNSMLRAQLE
QANVANAALSEDMRKLTADWARAREELEQREAEWRREEESFNTYFSNEHSRLLTLWRQLV
AFRRHFGEMKATTERDLVDLGHEVSRTGRAAHAACLHLAANLRLAESQAGAARERQELRL
EQLQEQLAARARDAELEKATLAARLEELTAALEQRRSEDEEKEQAVEALTLQLRELEAAR
SREPTPEQVQALRSELELLRRTLHEVTQAVLADDPEAPAPAVSPPCPPVSPACPAVSPLR
SLSASAAAAAVHAALSRRQLQLQEARRQVEAGREVAGSLRRELGMLEQRLEQLGAEAGSC
RRAQEEAQREELRLRAQVEGLRRELCRAEAALAQEQQRAGALQQEREQLRRRSEGLQDCR
EQAARDAQAAQQQLERSQQQVQELEAQRAQAQQELLEAREELSRALLEAELARGEQEALA
EALGKAQGSCGELAESRRAAEAEERRLRDALARSSELAAGLARDKAELGRRLERLERDRE
RDRERNRDRDRELELLRARLESGERRDTERPRADPRDDGRGMREELRELRGLHERLRHSL
GQALQEQGAAGAALARARAEQERLRAEQERLGRAQAGLARDGAGLGVRIEAAERRRRHRD
SETAGLRSQKEALESRVLQLQQELAQLQARNQQLEAQGRSLAHAKEALEAELAVAQRERA
QELRERCQAVAVAEVAAVTAALQSTHDTHREQLQLLQRQKEELEAERGRMVQEHEELVAE
LAAERQQRQSEKQQALALQEEERVALAGTLAGLQRSLDEATAELEQRRRELSGHQEQEEA
MAAELRSLRARAEAAALTHEREVRALRDRAAAAAQQRDGALREAEEARAELRAAVEARAA
ALREMREARRELRDNRESRDSERRRAREANRALGDAAREKEALQRSNEELRAALLRAEGE
RVSLKRSGEDKEQRLALLEGARAAAEQEVSELRAALRGLERGRLESRRELQELRRQVKEL
DGENSRRGRELGELQARVALEEQREQRSRREASGLRQKVVESEASAEAARKELQQLQQRL
AAAEQQFLRREQELSRSLEEARGHEKKLLADTRNLQLKVEAARAEVAELGLRLSAAQGRA
QGLEEELARGEEQRRVTESRLGGLQATLRRAVAVARAKGPEGPGSPGSVPDPDPDPGTDP
GTDPEALRAALREFLRELQEAQREREELRGQLGSLGRRLAEAEAERDRAGARAERLQERL
DESERGRRELSAARASLLLQDENRRRWQREQRGMRQRLSALRGQRQEQLGELEEARQRLE
VSESRSSRLELQRQALEAELGRARRALAGREEEAREARQRAERLRTQLAQAESRPGPVPG
GGSKAEAPDGSRLHERLRQLQDALAAGETDRRLLQEGLEEARRALAEARREKGMLREQLR
EQWELGALREPGFLWEPGMLREPGFLREPGMSGFLREPGMLREPGMPPEPPQDPQQEERD
PPVGLPTGPDPNAGPDPNAGPDPNTGPDPNVGPDPPMGSAEQELEEARKRIQVLRAVPSP
GCRAPLPAGAGVGAGAPGPAAPRGTRGAAAAAGAAPARPRQPGGADRAAQGAGAAAASPR
NLGNSGNSGNSGNSGTSAGTGAAPGFGDRSPIPKSTAEPGTAPGLGGSIPILGFGGSIPI
PNPKIHSRARHSSGIFGDPSPFLIPKSTAQPGTAPGFLGIHPHSGIFGDPSQSPIPKSTA
APLRAEGDPAPSLCSKPAAIFVSSFPFFQEKAALFPAADKICLFLIQFGTSWMVYPFSCC
SF
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctgctgtccctgcaggaggagaacaggatcctgcagcaggagctgtcccgt
gtcgaggacctgctggcccagagccgggccgagcgcgatgagctggccatcaagtacaac
gccctcagcgagcggctggagcagagcctgcggctggagccggaggaaggcgccgagagc
cggagcctggcccagcacaacatcgagctgcggaggctgctggaggaggagcaggctgcc
tacaagaggaagctccaggcctaccaggagggccagcagcgccaggcccagctggtgcag
aagctccaagccaaggtgctgcagtacaagaagaaatgtggggaagtggagcagcagctg
ctggagaaggcgacggagctggagcaggagaggctgacgatccagctggatgccagcggc
tcccagcacgatgaggagagcagcaacgagctggagaacgccctgatccgactggaagag
gagcagcagaggagcagcagcctggtgcaggtgaactcgatgctgcgggcgcagctggaa
caggccaacgtggccaacgcggcgctgagcgaggacatgcggaagctgacggcggactgg
gcgcgggcccgggaggagctggagcagcgggaagcggagtggaggcgggaggaggagtcc
ttcaacacctacttcagcaacgagcacagccggctgctgaccctctggcggcagctggtg
gccttcaggcgccacttcggggagatgaaagccaccaccgagagggacctggtggatctg
ggccacgaggtgtcccggacgggccgcgctgcccacgccgcctgcctgcacctggctgcc
aacctgcggctggccgagagccaggcgggcgcggcccgagagcggcaggagctgcggctg
gagcagctgcaggagcagctggcggcgcgggcacgggacgccgagctggaaaaagccacc
ctggcagccaggctggaggagctgacagcagccctggagcagcgccggagcgaggacgag
gagaaggagcaggcggtggaagcgctgaccctgcagctgcgggagctggaggctgcgcgt
tcccgggagccgacgccggagcaggtgcaggctctgcgctccgagctggagctgctgcgc
cggacgctgcacgaggtcacccaggcggtgctggcggatgatcccgaggcccccgcgccc
gccgtgtccccgccgtgtccccctgtgtcccccgcgtgtcccgccgtgtcccctctccgc
agcctctctgccagcgccgccgccgccgccgtccacgcggccctgagccggcgccagctc
cagctgcaggaggcccggaggcaggtggaggcgggccgggaggtggccgggagcctgcgg
cgggagctgggaatgctggagcagcggctggagcagctgggagccgaggccgggagctgc
cggcgggcgcaggaggaggcgcagcgggaggagctgcggctgcgggcccaggtcgagggg
ctgcgcagggagctgtgccgcgcggaggcggcgctggcgcaggagcagcagcgcgcgggg
gccctgcagcaggagcgggagcagctgcggcgccgcagcgaggggctgcaggactgccgc
gagcaggcggcccgcgatgcccaggctgcacagcagcagctggagcgcagccagcagcag
gtgcaggagctggaggcgcagcgggcacaggcacagcaggagctgctggaggcgcgggag
gagctgagccgggcactgctggaggcagagctggcacggggcgagcaggaggcgctggca
gaggccctgggcaaggctcagggcagctgcggggagctggcagagtcccggcgggcggcg
gaggcggaggagcggcggctgcgggacgcgctggcccggagcagcgagctggcggcgggg
ctggcccgggacaaggcggagctgggccggcggctggagcggctggagcgggaccgggag
cgggaccgggagcggaaccgagaccgggaccgggagctggagctgctgcgggcgcgccta
gagagcggcgaacggcgggacacggagcggccccgggcggacccccgggatgacgggcgg
gggatgcgggaggagctgcgggagctgcgcgggctccacgagcggctgcgccacagcctg
gggcaggcgctgcaggagcagggtgccgcgggcgcggcgctggcgcgggcccgggcggag
caggagcggctccgggcggagcaggagcggctgggccgggcccaggcggggctggcccgg
gacggggccgggctgggagtgcggatcgaggcggccgagcggcggcggcggcaccgggac
agcgagaccgcggggctcaggtcgcagaaggaggccctggagagccgcgtgctgcagctg
cagcaggagctggcccagctccaggcccgcaatcagcagctggaggcccaaggccggagc
ctggcccatgccaaggaggcgctggaggccgagctggccgtggcgcagcgggagcgggcg
caggagctgcgggagcggtgccaggcggtggcggtggccgaggtggccgcggtgacagcg
gcgctgcagagcacccacgacacccaccgggagcagctgcagctcctgcagcgccagaag
gaggagctggaggccgagcggggccggatggtgcaggagcacgaggagctggtggccgag
ctggcggcagagcggcagcagcgccagagcgagaagcagcaggctctggcgctgcaggag
gaggagcgggtggccctggcggggacactggcagggctccagcggagcctggacgaggcc
acggccgagctggagcagcggcggcgagagctcagcggccaccaggagcaggaggaggcc
atggccgcagagctgcgctcgctgcgggcacgggcggaggcggcagcgctgacccacgaa
cgggaggttcgggcgctccgggaccgagcggcagcggctgcccagcagcgggacggagcc
ctgcgggaggcggaggaggcgcgggcagagctgcgggcggcggtggaggcgcgggcggcg
gcgctgcgggagatgcgggaggcgcggcgggagctccgggataaccgagagagccgcgac
agcgaacggcggagggcgcgggaggcgaaccgggccctgggagacgctgcccgggagaag
gaggcgctgcagcgctccaacgaggagctgcgggcggccctgctgcgcgccgagggagag
cgcgtcagcctgaagcgctccggggaggacaaggagcagcggctggcgctgctggagggg
gcacgggcagcggccgagcaggaggtgtcggagctgcgggcggcgctgcggggactggag
cgcggccgcctggagagccgcagggagctgcaggagctgcgccgccaggtgaaggagctg
gacggcgagaacagccggcggggccgggagctgggggagctgcaggcgcgggtggctctg
gaggagcagcgggagcagcggagccgccgcgaagcctccggcctcaggcagaaggtggtg
gagagcgaggccagcgccgaggctgccaggaaggagctgcagcagctgcagcagcgcctg
gctgcagcggagcagcagttcctgcggcgggagcaggagctgtcccgcagcctggaggag
gcgcggggccacgagaagaagcttctggcggacacacggaacctgcagctgaaggtggag
gcggcgcgggccgaggtggccgagctggggctgcggctgagcgcggcgcagggccgggcg
cagggcctggaggaggagctggcccgcggcgaggagcagcgccgggtcaccgagtcccgc
ctgggcggcctccaggccaccctgcgccgcgccgtggccgtggccagggccaagggcccg
gaggggccgggcagccccggctcggtcccggatcccgatcccgatcccggtaccgatccc
ggtaccgatcccgaggcgctgcgggcggcgctgcgggaattcctgcgggagctgcaggag
gcgcagcgggagcgggaggagctccgggggcagctgggcagcctcggccggcgcctggcg
gaggcggaggcggagcgggaccgcgccggggcccgcgcggagcggctgcaggagcggctg
gatgagagcgagcgaggacggcgggagctgagcgctgcccgcgcctcgctgctgctgcag
gatgagaaccggcggcgctggcagcgggagcagcgcgggatgcggcagcgcctgagcgcc
ctgcggggccagcggcaggagcagctgggcgagctggaggaggcccggcagaggctggag
gtgtccgagagccggagctcccggctggagctgcagcgacaggcgctggaggccgagctg
ggccgggcgcggcgggcgctggccgggcgggaggaggaggcgcgggaggcgcggcagcga
gcggagcggctccgcacgcagctggctcaggccgagtcccgcccggggccggtgccgggg
ggcggctccaaggcggaggctccggacgggtcccggctccacgagcggctccggcagctc
caggacgcgctggccgccggtgaaacggaccggaggctgctccaggaggggctggaggag
gcgcggcgggcgctggcggaggcgcggcgggagaagggaatgctgcgggagcagctgcgg
gagcagtgggagctgggagcgctgcgggagccgggattcctctgggaaccgggaatgctc
cgggaaccgggattcctgcgggaaccgggaatgtcgggattcctgcgggaaccgggaatg
ctccgggagccgggaatgccgccggagcccccccaggacccacagcaggaggagcgggac
cctcccgtggggctcccaacggggccggatcccaatgcggggccggatcccaatgcgggg
ccggatcccaacacggggccagatcccaacgtggggccggatcctcccatgggctcggcc
gagcaggagctggaggaggctcggaagcgcatccaggtgctgcgggcagtgcccagcccg
gggtgccgggcaccccttcccgcaggcgcaggtgtcggcgctggagctccgggcccggcc
gctccccgaggcacccgcggagctgcggcggcagctggagcggctccggctcggccgcgg
cagcctggaggagcagatcgcgctgctcaaggagcaggagctgcagcggcatccccccgg
aacttagggaattccgggaattccgggaattccgggaattccgggacatccgcagggacc
ggcgcagctccaggattcggggatcgatccccgatcccaaaatccacagcagagcccggc
acagctccaggattggggggatccatccccattctgggattcgggggatccatcccaatt
cccaatcccaaaatccacagcagagcccggcacagctccgggatttttggggatccatcc
ccattcctgatcccaaaatccacagcacaacccggcacagctccgggatttttggggatc
catccccattccgggatttttggggatccatcccaatccccgatcccaaaatccacagca
gctccgctcagggctgagggggatccagccccatccctgtgctccaaacccgcagcgatt
tttgtttcctcgtttccttttttccaggaaaaagctgcacttttcccagcagccgacaaa
atttgtctatttttgatacaatttggcacctcgtggatggtttacccattttcctgttgc
agtttttaa
DBGET
integrated database retrieval system
