Taeniopygia guttata (zebra finch): 115498207
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Entry
115498207 CDS
T01082
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
115498207 (TIA1)
03041 Spliceosome [BR:
tgu03041
]
115498207 (TIA1)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115498207 (TIA1)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115498207 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
Calcipressin
XOO_2897-deam
Flg_new_2
Motif
Other DBs
NCBI-GeneID:
115498207
NCBI-ProteinID:
XP_032608293
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All DBs
Position
22:3541580..3551738
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AA seq
364 aa
AA seq
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MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFSEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS
TFETNTKQLSYEEVVTQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY
SFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETADMAGPVPQGQLSYPPAYGQWGQW
YGGAQLGQYVPNGWQVPAYGVYGQAWSQQGFGQNQPWLGPGYGPGQNGAVVPAQPGFRVG
FESP
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaaatgcccaagaccctctacgtggggaacctctccagggacgtgaccgag
gctctgatcctccagctcttcagccagatcggcccctgcaagaactgcaagatgatcatg
gatacagctggcaacgacccctactgcttcgtggagttctccgagcaccggcacgcggcc
gcggcgctggctgccatgaacggcaggaagataatgggtaaggaggtcaaagtgaactgg
gccaccacccccagcagccagaagaaagacaccagcaatcatttccacgtctttgtcgga
gacctcagccctgagatcacaactgaagacatcaaagcagcctttgctccctttggaaga
atctcggacgcacgggtggtcaaggacatggccacgggcaagtccaagggctacggcttc
gtctccttcttcaacaaatgggacgccgagaacgccatccagcagatggggggccagtgg
ctcgggggccggcagatcaggaccaactgggccaccaggaaacctccagctcccaagagc
acctttgagacaaacaccaaacaattgtcctacgaggaggtggtcactcagtccagcccc
agcaactgcaccgtgtactgcgggggggtcacctcgggcctcacagagcagctgatgcgc
cagaccttctcccccttcgggcagatcatggagatccgagtgttcccggacaaaggctac
tccttcgtcaggttcagttcccatgagagcgccgcccacgccatcgtctccgtcaacggc
accaccatcgagggccacgtggtcaagtgctactggggcaaggagacggccgacatggcc
gggcccgtgccgcagggccagctgagctacccgccggcctacgggcagtgggggcagtgg
tacggcggtgcccagctgggccagtacgtgcccaacggctggcaggtgcccgcctacggc
gtctacggccaggcctggagccagcagggcttcgggcagaaccagccgtggctgggcccc
gggtacggcccaggccagaacggggccgtggtgccggcccagcccggattccgcgtgggc
ttcgagagcccctga
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