Taeniopygia guttata (zebra finch): 115498383
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Entry
115498383 CDS
T01082
Symbol
F11R
Name
(RefSeq) junctional adhesion molecule A
KO
K06089
junctional adhesion molecule 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04514
Cell adhesion molecule (CAM) interaction
tgu04517
IgSF CAM signaling
tgu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115498383 (F11R)
04517 IgSF CAM signaling
115498383 (F11R)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115498383 (F11R)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
115498383 (F11R)
04090 CD molecules [BR:
tgu04090
]
115498383 (F11R)
Cell adhesion molecules [BR:
tgu04515
]
Immunoglobulin superfamily
CTX family
115498383 (F11R)
CD molecules [BR:
tgu04090
]
Proteins
115498383 (F11R)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
I-set
Ig_2
V-set
C2-set_2
Ig_6
Zwei_Ig_N
Motif
Other DBs
NCBI-GeneID:
115498383
NCBI-ProteinID:
XP_030147034
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All DBs
Position
25:complement(1478565..>1488745)
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AA seq
285 aa
AA seq
DB search
LLLLLLLLGGLAALAAAQVTSEDQEVPEHKPVSLRCAAFRSGSGSARIEWKFQRGSSLVL
IYYGGELTEPYRDRVQFSPTSIRFQSVTREDSGKYICEVVADGSHIAKSEVNLIVQVPPG
KPLAHVPSSATVGARAVLRCSEAQGSPPPTFRWYKDGTELPTDPRASPAFRNSSYSLDPR
SGELVFDPVGGWDTGDYHCEASNNVGSPQKSDVFRMEASEVNVGGVVAAVVLLLLVLALA
AFGLWFAHRRGYCGKKTDAGGKKVIYSQPSRRSEGEFKQTSSFLV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ctcctcctgctgctgctgctgctcggggggctcgccgcgctggccgcagcccaggtgacc
tcggaggaccaggaggtgccggagcacaaacccgtgtctctgcgctgcgccgcgttccgc
tccggctccggcagcgcccggatcgagtggaagttccagaggggctcgagcctggtgctg
atctactacgggggggagctcacagagccgtaccgggaccgtgtccagttctcgcccacg
tccatccggttccagtcggtgacgcgggaggacagcggcaaatacatctgcgaggtggtg
gccgatggcagccacatcgccaagtccgaggtcaacctcatcgtgcaagtgcccccgggg
aagccgctggcacacgtgcccagctcggccacggtgggggcgcgggcggtgctgcgctgc
tcggaggcgcagggctcgcccccgcccaccttccgctggtacaaggatggcaccgagctg
cccacggacccccgggccagccccgccttccgcaactcctcctacagcctggacccccgc
tccggggagctggtctttgatcccgtgggggggtgggacacgggcgattatcactgtgag
gcctccaacaacgtgggcagcccccagaaatccgacgtgttccgcatggaagccagcgag
gtgaacgtgggcggtgtcgtggccgccgtggtgctgctgctcctggtgctggcgctcgcc
gccttcggcctctggttcgcccaccggcgcggctactgcggcaaaaaaacagatgccggc
ggcaagaaggtgatctacagccaaccctcgcggcgcagcgagggcgagttcaagcaaacc
tcctccttcctggtgtga
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