Taeniopygia guttata (zebra finch): 115498527
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Entry
115498527 CDS
T01082
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain containing-NOGO receptor-interacting protein 4
KO
K18808
toll-like receptor 13
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tgu04054
]
115498527
Pattern recognition receptors [BR:
tgu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115498527
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_14
LRR_6
STAS_2
Motif
Other DBs
NCBI-GeneID:
115498527
NCBI-ProteinID:
XP_032608858
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Position
25:39365..43279
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AA seq
514 aa
AA seq
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MNITLYSITHITVLAYKAQVRPLHPPEGVSPYGFRNCIQAPWDPGLFRCIQRFLSTVGAA
VGDLPSTATSLNLSVNILRQVPPGAFAHLPQLYTLDLTHNQLEHLAPGAFWGLPALVHLD
LAHNNVSVLATGVFSGLGNLSTLRLDHNPLQKVAPRAFQPLAALSALWLRDGRLRALEPV
AVAVGNLTHLDLLDLCVNTLSTLGPGLPPTLRVLRLCNNSLGALSGATPGVMPSGLRVLD
LSYNNISDPAPLARLCLSNLTFLHLAGNPLDVAQLLRVAGISPRQVDMSGLQVGTSGLEY
LCQQLRGQQLQRLQLQRVGLTAMPDGALAECPVLGALDLSGNRLRHLGCVGRLLNRAQHA
ALRELVAEHNLLQRLPSCNGSPVLRQLHNVSLRFNRILVAGAGAFDNAPALRQLRLDVNG
LARLDRAALRGLHDLRHLRLDNNLLTDLLPGSFADLHQLGDLNLRNNRVAVLFPGAFKGL
DHLQTLDIFIHILIYCLHISIVRFRFLKGLYCLK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaccctgtacagtatcacccatatcaccgtgctcgcctacaaggcccaggtg
agacccctacacccacctgaaggggtctctccctacggcttccgcaactgcatccaggca
ccgtgggaccctggtctgttccgctgcatccagcgcttcctgagcaccgtgggggctgca
gtgggcgacctcccctccactgccacatccctcaacctctctgtcaatatcttgcgccag
gtgccccctggtgcctttgcccacctgccgcagctctacacccttgatctgacccacaac
cagctggaacacctggccccaggggctttctgggggctgccagcactggtgcacctagac
ctggcccacaacaacgtgtcagtgctggccacgggtgtgttctctgggctgggcaacctg
agcacgctgcggctggaccacaatccgctacagaaagtggcccccagggctttccagccg
ctggccgcactcagcgcgctctggctgcgggatggccggctccgcgcgctggagcccgtg
gccgtggctgtggggaatctgacgcacctagacctgctcgacctgtgcgtcaacacgctg
tcgacactgggcccggggctgccgcccacgctgagggtcctgcgcctctgcaacaactcc
ctgggagctctttcaggggccacccctggggtgatgccctcagggctgcgtgtgcttgac
ctgtcctacaacaacatctcagaccctgcgccgctcgctcgcctgtgcctgagcaacctg
acattcctgcacctggctgggaacccgctggacgtagcgcagctgctgcgcgtggctgga
atctccccgcgccaggtggacatgtcagggctacaggtgggcacgagcggcctggaatat
ctgtgccagcagctgagaggacagcagctgcagaggctgcagctgcagcgcgtggggctc
acagcaatgcccgatggggctctggccgagtgtccggtgctgggtgccctggatttatct
ggcaaccggctgcggcacctgggctgcgtcgggcggctgctgaaccgggcacagcacgca
gcgctgcgcgagctggtggccgagcacaacttgctgcagcggctgccatcgtgcaacggg
tccccagtcctgcggcagctgcacaacgtgtccctgcgcttcaaccgcatcctggtggcc
ggtgcgggtgcttttgacaatgcaccggcgctgcggcagctgcggctggatgtgaacggg
ctggcacggctggaccgcgcagcgctgcgtggactgcacgacctgcggcacctacgcctt
gacaacaacctgctcactgacctcctgcccggctcctttgctgacctgcaccagctgggc
gacctcaacctgcgcaacaatcgcgtggccgtgctcttccctggcgccttcaaggggctt
gaccacctgcagacccttgatatttttatacatatcttaatatattgcttacatatttct
atagttagatttagatttctgaaaggtttatattgcttaaaataa
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