Taeniopygia guttata (zebra finch): 116806789
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Entry
116806789 CDS
T01082
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
116806789
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116806789
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116806789
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
HA2_N
Motif
Other DBs
NCBI-GeneID:
116806789
NCBI-ProteinID:
XP_032600309
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All DBs
Position
Z:complement(73764866..73773380)
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AA seq
545 aa
AA seq
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MLEFQSPELLRMPLQEICLYTKLLAPVNCPIVDFLMKAPDPPPAVTVRNAVHMLKTIDAM
DPWEDLTELGYHLTELPVEPHLGKMVLYAVVLKCLDPVLTIACALACQDPFVLPTLASQK
RAAVLCRKRFAAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMETIAGMRTQ
VLGQLRASGFVRARGGADIRDVNTNSENWAVIKGALVAGMYPNLVHVDRDSLVLTESKEK
KVRFHPTSALGQSQYKKIAPANGQAAAIQALPTDWLIYDEMTRAHKTANIRCCSVVTPVT
VALFCGPARLPSNALQASSSFRGGGVSNDSSDSEMEDKTSADLALLKLDEWLHLRLDPEA
AGMLLQLRQKWHSLFLRRMRAPSKLWSEVDETIVRAITAVLSAEEQSAGLQQPSGIDQRP
RPVTCEELPLASTCMSTNSRNSSTETELSDFSHAEKVSVKSTSPALHQPKKYKEKDILLS
RQSSDDRSAQSSVKLADSSSYSNPCATPSSPVSAKVEFSNISPCSSKVIEFLADIILQLG
ILLIN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgttggaatttcaatctccagaacttctaaggatgccgcttcaggagatctgtttgtac
acaaaacttctggctccagttaattgtccaattgtagactttcttatgaaagctcctgat
cctccgcctgctgtaactgtgagaaatgctgtgcatatgcttaagaccatagatgccatg
gacccttgggaagatctcactgagcttggttatcacctcactgaattacctgtagagcca
cacctcggtaaaatggtgttgtatgctgtagttctgaagtgcctggatcctgttctgacc
attgcctgtgctcttgcctgccaagacccttttgtgctgcccacgctggcctcccaaaag
cgtgcagccgtgctgtgcaggaagcgttttgctgccggaacgttcagtgaccacatggcc
ctgctcagggctttccaggcatggcagaaggcacgcagtgacggctgggagagagccttc
tgtgaaaagaacttcctatcccaagccacaatggaaaccattgcaggaatgagaacacag
gtgcttggccagcttagagcctcaggttttgtgagagccagaggaggagctgatattaga
gatgttaatactaactctgagaactgggctgtaattaaaggtgccttagtggccgggatg
tatcccaatcttgtgcatgtagacagagacagcctggtgttgacggaatcaaaggagaag
aaagtgcgatttcatcctacctctgctcttggtcagtctcagtataaaaagattgcccca
gcaaatggacaagctgcagccatccaggctctccctacagactggcttatatatgatgaa
atgacgagagctcacaagacagcaaacatcaggtgctgctctgttgtgacgcctgtcacg
gtggccctcttctgtggaccagccagactgccaagtaatgccttgcaggcatcttcatcc
tttcgagggggaggggtatctaatgatagcagcgacagtgagatggaggacaagacatct
gctgatctggcactgctgaagctggatgaatggctccatctcagactggaccctgaagct
gctggtatgctgctgcaactcaggcagaagtggcacagcttgtttctgcgtcgcatgcga
gctccttctaagctgtggtctgaggttgatgaaacaattgtaagagcaattacagctgtt
ctgagtgctgaagaacagtctgcaggtctacagcagccttcaggaattgaccagagacca
aggcctgtgacttgtgaagaacttcctttggcatctacatgcatgtcaaccaacagcaga
aacagctcaacagaaacagaattgtctgacttctctcatgctgaaaaggtttcagtgaaa
tctacttctcctgcactccaccagccaaagaagtacaaagaaaaagacattttgctctcc
agacaatcctcagatgacagatcagctcagtcctcagtgaagcttgcagacagcagtagc
tattccaacccctgtgctactccttcttctccagtgtcggcaaaggtagagttctctaac
atatcaccctgctcttccaaagtaatagaatttcttgctgatatcattctgcagttaggt
attttactgataaattag
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