KEGG   Taeniopygia guttata (zebra finch): 116806978
Entry
116806978         CDS       T01082                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tgu04121]
    116806978
   03400 DNA repair and recombination proteins [BR:tgu03400]
    116806978
Ubiquitin system [BR:tgu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    116806978
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116806978
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 DUF1510 GIP1_N UBA_RAD5A UBA_8
Other DBs
NCBI-GeneID: 116806978
NCBI-ProteinID: XP_032600665
LinkDB
Position
W:complement(19994556..20166427)
AA seq 1151 aa
MRARVGGRAGDELNFLFCTYIVLYILYMMTSVVSERTRGTRDKMQISTSQPTQPQKQVVQ
ATAEQIRLAQMIYDKNDTDFEDKVKQLMEVTGKNQDECIVALHDCNGDMNRAINTLLEGS
SDTTSWETVGGKKKNLGKEGLENKDNREKRGDREMSRGWGSSNRRGRGGSRGREFRAEEN
GVDNSQGDRPSDHGKHSHGRGFGRGRGRGAGRFSAQGMGTFNPADYMESSATDGFGTKSE
IWETGQNYADDGTGAWKNSVEEWTAEDWNEDLSETKVFIASSVPAENHVTPRQSIDLVTL
LQKPEKPVTLTQETEGNSFEAPQQQTFGQALVFTNSQHSTQMASGTGSSSAVNSYSPQSL
SAVLCPGFREHGSPKLKNSTGFQILDQLKSPGLGQFTSQQNNNSSTTTTTSSWDQKLPVT
QASVLSQFDLKSHPQPSPVLIHLTQRQQQQTQIAPVPPPGLQSFSQVKLHEPLPVDTSTA
VSKMLQLPTISMDNPEVTAHQTQQKQIKPPKRRITPASKIPASAVEMPGSADVTGLNVQF
GALEFGSEPTLTEFGSTSSSENTSQATNNSLYSKSVMYVDPLNTSLPISNTVQESTYTTS
AISSSSLTCSSQSTNPVTTSSYEQTSVLSRIVYESSMAPSEPTPVAVTNGHSSVRTQATL
DTTSSVPALKTEPSPSLPSADSLRGMVSTTASLLPSASQHAGTLPSLPQSIDLSSSSLSQ
LSSSLSNHQSSLSPASVLSSSTSHVHTSVENTTSLQPSTTFSTASTSDTSTTSSVVSMAS
SMNTTASLGLSVTSVSATTGAAPLMSSGKAPPNLPQGVSPLLHNQYIVGPGGLLPAYPQI
YGYDDVQMLQSRLPMVEIFACASWQQMQDYYGITFPAPATLTGRDGSLANNPFSGDITKF
GRGDSASPSPATTLAQSQQNQTQTHHTTQQPFLNPTLPPGYSYTGLPYYAGVPGVPSAFQ
YGPTMFVPPASAKQHGVNLNTTSTPFQQGSGYGQHGYGAGYDDLTQGTAAGDYSKGGYSG
SSQAQNKSAGTGPGKGVSVTSSNTGVPDISGSVYNKIQTFDKQGFHAGTPPSFSLPSALG
STGLNPGAAPGYAPAPFLHILPAHQQPHSQMLHHHLQQDGQGGSGQRNQPSTMQQKSQAT
KTYGTSPYWTN
NT seq 3456 nt   +upstreamnt  +downstreamnt
atgcgtgccagagtgggcggaagggctggtgatgagttaaattttctattttgtacatac
attgttttgtatatactatatatgatgacttcggtggtcagtgaacgtacccggggtact
agggacaaaatgcaaatttcaacctctcagccaacacaaccacagaaacaagtagtacag
gcaacagcagaacaaattcgccttgctcagatgatctacgataagaatgacacagatttt
gaagataaagtgaaacaacttatggaagtgacggggaaaaaccaggatgagtgcatagtg
gcactacatgattgtaatggggacatgaacagagcaattaacacattgctggaaggaagt
tcagacacgacttcttgggagactgtagggggaaagaagaaaaaccttggaaaagaaggt
ttggaaaacaaagacaacagagagaaacgaggggacagagaaatgagccgtggatgggga
agttccaacagacggggaagaggaggcagccgtggccgagagttcagagctgaagagaat
ggagtggacaacagtcaaggagacaggccttcagaccatgggaaacatagccatgggaga
ggttttggacgtggcagagggagaggagcagggaggttttcagcccaaggcatggggaca
tttaaccctgcagactatatggagtcttcggccactgatggctttgggacaaaatcagag
atttgggagactggtcagaattatgcagatgatggaactggagcatggaaaaactcagta
gaagaatggactgcagaagattggaatgaagatctttctgaaacaaaagtcttcattgct
tcctctgttccagctgagaatcatgtgactcctaggcaaagcattgatttggtaacgctg
cttcaaaagcccgaaaagcctgtgacccttacccaagagacagaaggcaactcatttgag
gctccccagcaacagacctttggccaagcccttgtcttcacaaattctcagcacagcacc
cagatggcatcaggaactggcagctccagtgctgtaaactcttattctcctcaaagtctg
tctgcagtcctttgtcctggctttcgagaacatgggtctcctaaactgaaaaactctact
ggattccaaatcttggaccaattgaaatctccaggtttgggtcagtttacctctcaacaa
aacaataatagctctactaccactaccacatcatcctgggatcaaaaactgcccgttacc
caggcgtcagtccttagtcagtttgacttgaaatcgcatcctcaaccatccccagttcta
atccatctgacccagcgacagcaacaacaaacacagatagcccctgttcctcctcctggg
ctgcagtccttctcccaggtaaaactccacgagccattaccagtagacacctctaccgct
gttagcaaaatgttacagctgcctactatatctatggataacccggaagtgactgcccac
caaacccagcagaagcagataaaaccaccaaaacggaggataactccagcatccaagatt
cctgcctctgcagtggagatgcctggatcagcagatgtgacaggattaaatgttcagttt
ggagctttggagtttggatcagagcctacgctcacagaatttggatcaacttcaagcagt
gagaataccagccaggcaaccaacaatagcttgtactcaaaatctgtcatgtatgttgat
cctttgaatacctctctgccaatatccaatacagtacaggagtccacctacacaacctct
gccatcagctcttccagtctgacctgctcatcccagagcactaacccagtaacaacttcc
tcctatgagcagacttctgtacttagtaggatagtgtacgaaagctccatggctccatct
gaaccaactcctgttgcagttacaaatggacacagcagtgttagaacacaggcaactctt
gacactacttcatcagttcctgcgcttaagacagagccttctccctcactaccttctgct
gattctctgcgcggcatggtgtccactactgcttcacttctgccttcagcatcgcagcat
gcaggaactttgcccagcttgcctcagtccattgatctgtccagcagctcactctcacag
ttaagcagctccctttccaatcatcagagcagcctctcccctgcctcagtgttgtcttca
agcacatcacatgtgcacactagtgttgagaacaccacttctcttcagccttcaacaaca
ttttcaactgcttcaacctcagacactagcaccacctcttcggttgtcagcatggcaagc
agtatgaacactacagctagccttggccttagtgttaccagtgtgtctgctaccacagga
gcagctcccttaatgtcttcaggcaaagctcccccaaatctgcctcaaggtgtatcaccc
ttgttgcataaccagtatattgtgggacctggaggacttctgcctgcctacccacagatt
tatggttatgatgatgtccagatgcttcaatccaggctgccaatggtggagatctttgca
tgtgcatcatggcaacaaatgcaggattactacggaattacattccctgctcctgcaacc
ttaacaggcagagatggaagccttgctaacaaccccttctcaggtgacataacaaaattt
ggccgtggggattctgcctccccttctcctgctaccacgctcgcccagtcgcagcagaac
cagactcagactcaccatacaactcagcagccattcctcaatccgaccctgcccccaggg
tacagctacactgggttaccttattatgctggtgtgcccggtgttcccagtgcattccaa
tatgggccaactatgtttgtacctccagcatctgctaaacagcatggagtcaacctgaac
accacgtcgactccttttcagcaagggagtggctatgggcagcatggctatggggcaggc
tatgatgacttaacgcagggaacagcagcaggagattacagcaaaggaggctacagtggg
tcatctcaagcacaaaacaaatctgctggcactggtcctgggaaaggtgtttctgtgacc
tcaagtaacacgggtgtgcctgatatcagtggctcagtctataacaagattcagacattt
gataaacagggattccatgctggcacaccaccttcttttagcctcccctctgctcttgga
tcaactgggctgaaccctggtgctgccccaggttatgctccagccccgtttctccatatc
ctccctgcgcatcagcagcctcattcccagatgctgcatcaccatcttcagcaagatggg
cagggtggatctggccaacgcaatcaacccagcaccatgcagcaaaagtctcaggctacc
aaaacctatggtacttctccatactggacaaactaa

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