Taeniopygia guttata (zebra finch): 116808838
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Entry
116808838 CDS
T01082
Name
(RefSeq) B-cadherin-like isoform X1
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116808838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
116808838
Cell adhesion molecules [BR:
tgu04515
]
Cadherins
Major cadherins
116808838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
116808838
NCBI-ProteinID:
XP_032606369
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All DBs
Position
11:20060420..20066377
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AA seq
967 aa
AA seq
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MGLAGLLCSRAGLPPRAVGLGRGSAVPRGPAVPRGVGGAPWGRRCPSGLTGLAAGDAIAF
GPAVGCPLPAGLGPRRVGGRHRAGSGAGCPRVALLRLWGAGSGRPEAGQGLLLPALGPLP
ELGPGPLPSPLGGSRGIGAAREGGRSSAHLMAAGALRALLGGSSGGCAGPYRTEEPDVGV
REDGGPVRLPGVGRALAVPPRDAASPRYVAGQPDPAPVPAESRSSPQELPGARAVLRRQK
RDWVIPPIKVPENERGPFPKKLVQIKSNRDRDTKIFYSITGQGADAPPEGIFTIEKESGW
MKVTQPLDREHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPE
GALPGTSIMQVTATDADDAVETYNGVIAYSILSQEPREPHPQMFTVNRATGTLSVIASGL
DRERVREYTLTVQAADLDGEGLTTTALAVIEIADVNDNAPEFDPKTYEAAVPENVAGREV
ARLAVTDLDEPGTPAWRATYSILHGNDGGAFAISTDPATNEGILRTAKALDYEAKQQFVL
HVAVANEVPFVVKLPVATATVTVTVEDVNEAPEFVPPVQLATVSEDVPPGQTLTACTAQD
PDKAQGQRIKYLVGHDPAGWLAVHPENGLVTARDHLDRESPFVKNSTYIAVLLAVDDGSP
PATGTGTLLLTLLDVNDNGPEAEPRDITVCQRSPQPQLLTVTDRDLPPNTGPFRAELTHG
SGDSWAVEVGDTGDTVTLQLVAPLEPDTYSVYLRLLDQPGRAQVTIVTARVCACEGQAQG
CPQRSQPVTALPFVLAALGALLALLLLLLLLLLFVRRRKVTKEPLLLPEDDTRDNIFYYG
EEGGGEEDQNYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPDEIGNFIDENLK
AADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGRFRKLAELY
GGGEEDD
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggggctggcggggctcctgtgctccagggctgggcttcccccccgggccgtggggctc
ggccgtgggtcggctgtgccccgtgggccggctgtgccccgtggggttggcggtgccccg
tggggccggcggtgcccgtctggtctcactgggctggcggcgggtgatgccatcgccttt
ggcccagccgtggggtgccctctgccagcagggctgggtccccgcagggtgggcggccgg
caccgggctggcagtggggctgggtgcccgagggtcgcccttctccggctgtggggtgcg
ggctctggccggcctgaggctgggcagggtttgctgctgccagctcttggcccgctgccg
gagctcggcccgggcccgttgccctctccgctcggcggctcccgggggattggggctgcc
cgggaaggcggccggagcagcgctcatctaatggccgcgggagcactgcgagctctcctt
ggcgggagctccggaggctgcgcggggccgtacaggacggaggagcccgatgtcggggtg
cgggaggacgggggccccgtgcggctaccgggggtgggcagggcgctcgctgtacccccc
cgagatgctgcttctccccgatatgtcgctggccagccagaccctgccccagtgcccgca
gagagcaggagctccccgcaggagctgcccggggctcgcgctgttctcaggaggcagaag
agggattgggtgatcccccccatcaaagttcctgaaaatgagaggggccccttccccaaa
aagctggttcagatcaaatccaacagggacagagacaccaagatcttctacagcatcaca
gggcagggagcggacgcgcctcccgagggcatcttcaccatcgagaaggagtcgggctgg
atgaaagtgacgcagccgctggaccgcgagcacatcgacaagtaccacctcttctcccac
gctgtgtctgagaacgggaagccagtggaggagccgatggagatcatcgtgaccgtgacg
gaccagaatgacaacaagccccagttcacacaggaggtgttcaggggctctgtgccagag
ggagctctgccaggcacctccatcatgcaggtgacagccacggacgcggacgatgcagtg
gagacctacaacggtgtcatcgcctactccatcctcagccaggagccgcgggagccccat
ccccaaatgttcactgtcaaccgggccaccggcaccctcagcgtgattgccagcggcctc
gaccgggagcgcgtgcgggagtacacactgaccgtgcaggcagctgacctggatggagag
ggactgaccaccacggcgctggctgtcatcgagatcgccgatgtcaatgacaacgccccc
gagtttgaccccaaaacgtacgaggcggccgtgccggagaacgtggcggggcgggaggtg
gcccggctggctgtcaccgacctggacgagcccggcacgccggcgtggcgagccacctac
tccatcctgcacggcaacgacggcggtgcctttgccatcagcaccgaccccgccaccaac
gagggcatcctgcgcactgccaaggctctggactatgaggccaagcagcagttcgtgctc
cacgtggcagtggccaacgaggtccccttcgttgtgaagctgccggtggccaccgctacg
gtgactgtcactgtggaggatgtcaatgaggccccggagttcgtgccgcccgtgcagctg
gccacggtgtcagaggatgtgcccccggggcagaccctcacagcctgcacggcccaggac
cctgacaaggcacagggccagaggatcaagtacctggtggggcacgacccggcgggctgg
ctggccgtgcaccccgagaatggcctggtgaccgcacgggaccacctggaccgcgagtcc
cccttcgtcaagaacagcacctacatagctgtgctgctggccgtggatgatggctcaccg
ccggccacgggcacgggcacgctgctcctcaccctgctcgatgtgaacgacaacggcccc
gaggccgagccacgggacatcacagtgtgccagcgcagtccccagccccagctcctcacc
gtcaccgaccgggacctgccccccaacaccggccccttccgcgccgagctcacccacggc
tcgggggacagctgggctgtggaggtgggggacacaggtgacacagtgacactgcagctg
gtggcaccgctggagccggacacctacagcgtgtacctgcggctgctggaccagccgggc
agagcccaagtgaccattgtcaccgcacgggtctgcgcctgcgaggggcaggcacagggc
tgtccccagaggtcccagcctgtcaccgccctgcccttcgtcctggccgccctgggcgcg
ctgctggccctgctgctcctgctgctgctgctgctgctcttcgtgaggaggaggaaggtg
acaaaggagccgctgctgctgcctgaagatgacacaagggacaacatcttctactacggg
gaggaaggtggcggcgaggaggaccagaactacgacctgagccagctgcaccgggggctg
gacgcccggcccgaggtgatccgcaatgacgtggctcccccgctcatggcggccccccag
taccggccccgtcccgccaaccccgacgagatcgggaacttcattgacgagaacctgaag
gcggccgacacggaccccacggcccccccctacgactcgctgctggtgttcgactacgag
ggcagcggctcggaggccacctcgctcagctccctcaactcctccgcctccgacggcgac
caggactacgactacctcaacgactggggcggccgcttccgcaagctggccgagctctac
ggcggcggcgaggaggacgattag
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