Taeniopygia guttata (zebra finch): 116809110
Help
Entry
116809110 CDS
T01082
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116809110 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
116809110 (RNF43)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116809110 (RNF43)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116809110 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
116809110
NCBI-ProteinID:
XP_032607658
LinkDB
All DBs
Position
19:10464452..10524698
Genome browser
AA seq
828 aa
AA seq
DB search
MSAGPQVQLAVLWPWLLMATLQAGLGHTGLALAAAVESERAAAQKAIIRVIPLKVEPIIL
EGEFASVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATR
RYQPRARLAPRWDSASSCSSAPVCAICLEEFSEGQELRIISCAHEFHRECVDPWLQQHHT
CPLCMFNILARDSGDQAMAASSRLVPQEMEPGRRLHLFRQHPGHALYHLPQAYPQRSLRS
FPPEPAHSNPFFHSPELSQLDFGTIHYMPYRPATSLLACGHVAPLAPGLLGQQHPNPSAC
GQALAPHRTCPLQPQPPCLAPKAAVAQKQHRVPTLRRGLGHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
TTDRGQEQLRPPRERRPRSLELMVPGGAALAKPQVLSHIHYHHHQHHHYRQDAERPPGQG
PGQRKPRYSGAKVAFHSARTQKRTEKSHHSQQPLESSVMLQEAAPAGQPACPQEGQEPPH
APSASPNRLDFGVDANRPLGAAGTPPVPLPPRHSLQSRHHRRKRKCHLEPDPALLPKDSA
EPGACDTHLPPSHPAGYRCSPEAQPLIPSAPLPSGSRPLWKCLVPQSSSELRKQEEGLSG
RERNHSVPADFSGTCTPRHSLSVRLHCPSQQGGQGSEEEVQDVREHSV
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccaggtgcagctggctgtcctctggccttggctgctcatggcgacc
ctgcaggcaggactgggccacaccgggctggcgctggcggcggccgtggagtcggagcgg
gcggcggcgcagaaagccatcatcagggtgatcccgctcaaagtggagcccatcatcctg
gaaggggagttcgccagcgtcgccgaggtgactccggccgaagggaaactgctccagtcc
cacccactatccctgtgcaacaccagcgaggatgaacacacggaatcggggttcatcacc
attgtcaagctggaacagccggatcgggatcccaacccctgcctgtccctggccaacaaa
gcaaaactggcaggggagcgtggagcccgtgcgatcctttttgacatcaccgatgatgaa
agtgctgctgatcagctgaggaagcccagaggcctcagccagcctgtggtcctaatcagg
ggccatgacgctgagctcctcatgggcgttgtgaacaagaacagagaggcccacgtgaag
atagaggtcaaggagccaccagcttggccagactacgacgtgtggattcttctcacagtg
gtcagcactgtggttgtcatcattttgatttttgttgtccgcacaaagtgccagctgaac
aggactcaggactcggtgcagcagcagaccctgcaggccattgggcaactggccacacgg
cgctaccagccccgggcacggctggccccgcgctgggactcagccagcagctgcagctcc
gccccggtctgtgccatctgcctcgaggagttcagcgagggccaggagctgcggatcatc
tcgtgcgcccacgagttccatcgggaatgtgttgacccttggctgcagcaacaccacaca
tgtccactttgcatgttcaatattcttgccagagactcgggggaccaggccatggctgcc
agctccaggctggtccctcaggaaatggagcctgggcgccgactccaccttttccgccag
catccaggacatgccctttaccacctcccacaagcatatcctcagaggagcctcaggagc
tttcccccagagccagcccacagcaaccccttcttccactctccagagctctcccagctg
gattttggcaccatccactacatgccctacagaccagccacctccctgctggcctgtggc
cacgtggcaccgctggccccaggcctgctggggcagcagcaccccaacccctctgcgtgc
gggcaggcgctggcacctcacaggacatgtccccttcagcctcagcccccctgtctggca
cccaaggcagccgtggcacagaagcagcaccgcgtgcccacgctgcgccgagggcttggc
cacgggcaccagcacaacagcagcggctctggggagagctatctcacggagcacagcggg
tacctggccgacgggccgggcagtgactccagctcggggccctgccacggctcctccagc
gactccatgttgaactgcacagacgtcagcctgcagggcatccacggcagctgctccacg
ttccgcagctccctcagcagcgactacgatcccttcgtgtactgcagctccgagggcccc
accacagaccgcggccaagagcagctgcggccgcccagggagaggcggccccggtccttg
gagctgatggtgcccgggggggctgctctggccaagccccaggtgctcagccacatccac
taccaccaccaccagcaccaccactacaggcaggacgcagagcgtccccctgggcagggg
cccgggcagcgcaaaccccggtattctggggccaaggttgccttccacagtgctcggacg
caaaagaggactgagaaaagccatcactctcagcagcctctggaaagcagtgtcatgctg
caggaggcagctccagcgggccagccagcctgtccccaggaaggccaggagccccctcat
gccccctctgcttccccaaacaggctggacttcggtgtagatgccaacagaccattggga
gcagctggcacaccacctgtcccactgccccccagacacagcttacagagcaggcatcac
cgaaggaaaagaaagtgtcacctggagcctgaccccgctctgctgcccaaggactcggcc
gagcccggagcctgcgacactcaccttcctcccagccatcccgctggctaccgctgctct
cccgaagctcagcccctgatcccaagtgctcccctgcccagtggctcccgcccactctgg
aaatgtttagtgccacagtccagctccgagctgaggaagcaggaggaggggttgtcagga
cgggagagaaaccactcagttcctgcagatttctcagggacgtgcacccccagacacagt
ctgagtgtccgtcttcactgcccatctcagcagggtggtcagggatctgaagaggaggtc
caggatgtccgtgaacactcagtttaa
DBGET
integrated database retrieval system
