Thermococcus guaymasensis: X802_00405
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Entry
X802_00405 CDS
T04184
Name
(GenBank) tRNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tgy
Thermococcus guaymasensis
Brite
KEGG Orthology (KO) [BR:
tgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgy03016
]
X802_00405
Enzymes [BR:
tgy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
X802_00405
Transfer RNA biogenesis [BR:
tgy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
X802_00405
Prokaryotic type
tRNA splicing ligases
X802_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AJC70825
UniProt:
A0A0X1KHT3
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All DBs
Position
64244..65683
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AA seq
479 aa
AA seq
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MVPLKRIDKIRWEIPKFDRRMRVPGRVYADDQLIEKMRGDRTLEQAANVAMLPGIYKYSI
VMPDGHQGYGFPIGGVAAFDVKEGVISPGGVGYDVNCGVRLIRTNLTEKEVRPRIKELVD
TLFKNVPSGLGSKGRVRLHWTQLDDVLADGAKWAVDNGYGWKEDLEHLEEGGRMEGADPN
AVSQKAKQRGAPQLGSLGSGNHFLEVQVVDKIFDKEIAKAYGLFEGQVVVMVHTGSRGLG
HQVASDYLRIMEKANRKYGIPWPDRELVSVPFQTEEGQRYFSAMKAAANFAWANRQMITH
WVRESFEEVFKRKAEDMEMHIVYDVAHNIAKVEEHEVDGRKVKVVVHRKGATRAFPAGHP
DVPRAYRDVGQPVLIPGSMGTASYILAGAEGSMKETFGSSCHGAGRLLSRKAATRRYRGD
RLRSELLQRGIYVRAASLRVVAEEAPGAYKSVDNVVNVVHQAGIAKLVARMRPMGVAKG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggttccgctgaagaggatagacaaaatccgctgggagattcccaagttcgacaggaga
atgcgcgttccgggcagggtttacgctgacgaccagctcatcgagaagatgcgcggggac
aggacgctggagcaggcggccaacgttgcgatgctccccggcatctacaagtactccatc
gtcatgcccgacggccaccaaggctacggcttcccaatcggtggtgtggctgcctttgac
gtgaaagaaggtgtaataagccccggaggcgtcggctatgacgtgaattgcggcgtcaga
ctgattagaacgaatttaacggagaaagaagtcagaccgaggataaaggagctcgttgac
acgctcttcaagaacgtgccttctggactgggaagcaagggaagagtgagactccactgg
acgcagctcgacgacgttctcgcagacggtgccaagtgggccgtcgataacggctacggc
tggaaggaggatttggagcatcttgaggaaggcgggaggatggaaggggccgacccgaat
gccgtcagccagaaggccaagcagagaggcgctccacagctcggctccctcggctccgga
aaccacttccttgaggttcaggtggttgataagatctttgacaaagagatagccaaggcc
tacggcctcttcgaggggcaagtcgtggtgatggttcacaccggttcgcgcggactcggc
caccaggtcgcgagcgactacctcaggataatggagaaggccaacaggaagtacggaatc
ccctggcctgacagagagctcgtcagcgtccccttccagacggaggagggacagaggtat
ttcagcgcgatgaaggcggccgcaaacttcgcctgggccaacaggcagatgataacccac
tgggtcagggagagctttgaggaggtcttcaagaggaaggccgaagacatggagatgcac
atagtctacgacgtcgcccacaacatagccaaggtggaggagcacgaggtagacggaagg
aaggtcaaggtcgtcgtccacaggaagggagcaacgagggccttcccagcaggccacccc
gatgtaccgagggcctaccgcgacgtcggccagcccgtcctgattcccggctcgatggga
accgcgagctacattctggccggagcagagggttcgatgaaggagaccttcggttcgagc
tgccacggcgccggaagactcctgagcaggaaagctgcaacgaggaggtaccgcggtgat
agactgagaagcgagctccttcagaggggaatctacgtgagggccgcttcgctccgtgtc
gttgccgaagaagctcccggagcctacaagagcgtcgacaacgtcgtcaatgtcgtccac
caagccggcatagcgaagctcgtcgcgaggatgcgcccgatgggcgtcgccaagggctga
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