Thermococcus guaymasensis: X802_06325
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Entry
X802_06325 CDS
T04184
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tgy
Thermococcus guaymasensis
Pathway
tgy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tgy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
X802_06325 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgy03021
]
X802_06325 (tfb)
Transcription machinery [BR:
tgy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
X802_06325 (tfb)
Prokaryotic type
Archaeal type
TFB
X802_06325 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_IS1595
Zn_Ribbon_Prim
RUBY_RBDX
Trm112p
Cyclin_N
HTH_AsnC-type
Ribosomal_S27e
HTH_Tnp_ISL3
FYDLN_acid
FtrD-like
UPF0253
ADK_lid
Zn_ribbon_SprT
A2L_zn_ribbon
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AJC71817
UniProt:
A0A0X1KKP5
LinkDB
All DBs
Position
1123431..1124342
Genome browser
AA seq
303 aa
AA seq
DB search
MADKRVCPVCGSTEFFFDRSRGELVCRVCGYVLEENIVDEGPEWRAFDPDQRAKRARTGA
PMTLMIHDKGLSTDIDWRDKDIHGNQITGMYRSKLRRLRMWQRRMRINDAAERNLAFALS
ELDRMAAQMRLPRRVKEAAAALYRKAVMKKLIRGRSIEGMVSAALYAACRMEGIPRTLDE
IARVSKVSKKEIGRSYRFMARGLGLNLRPTSPIDYVDRFGDALGVSARTKQRAKEILQEA
IKRGITSGKGPTGLAAAALYVASLLEGEKRTQREVAEVAHVTEVTVRNRYKELVEKLNIK
VPM
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttggccgataagagggtgtgtccggtttgtggatcaactgagtttttctttgatagaagt
aggggagaactcgtatgtagggtctgtggctacgtgcttgaggaaaacattgttgatgag
ggcccggagtggagggcctttgatccggatcagagggcaaagagggcaagaaccggggcg
ccgatgacccttatgatccatgataagggcctatcaacggatatagactggcgcgataaa
gatattcacggcaatcaaataactggcatgtacaggagcaagctcagaaggcttcgcatg
tggcagaggagaatgaggataaacgacgccgccgagaggaacttggcgttcgcgctgagc
gagctcgacagaatggcggctcagatgaggctgcccagacgggtcaaggaagccgccgct
gccctttatcgcaaggccgttatgaagaagctcatccgcggacgttcaatagagggcatg
gtttcggctgctctgtacgcggcctgcaggatggaaggcattccgagaacccttgatgaa
atagcgagagtgtcaaaggtcagcaagaaggagatagggaggagctaccgttttatggcg
aggggtctcgggttgaacctccgtcccacaagcccgatagactacgttgatcgttttggg
gatgccctcggtgtgagtgccagaacgaaacagcgtgccaaggaaatccttcaggaggcc
ataaagaggggaatcacgagcggaaagggtccaacggggcttgcagccgctgccctctac
gtcgcttcactcctggaaggtgaaaagagaacccagcgcgaggtcgctgaggttgcccac
gtaactgaagtgacggttaggaacaggtataaggagctcgttgagaagctcaacatcaag
gttccgatgtga
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