Thermococcus sp. AM4: TAM4_1482
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Entry
TAM4_1482 CDS
T01638
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
tha
Thermococcus sp. AM4
Pathway
tha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TAM4_1482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tha03021
]
TAM4_1482
Enzymes [BR:
tha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TAM4_1482
Transcription machinery [BR:
tha03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TAM4_1482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
EEB74115
UniProt:
B7R290
LinkDB
All DBs
Position
1089238..1090413
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AA seq
391 aa
AA seq
DB search
MVAAKTIKTLVWKSELPDNIKEELYNKLIEYNKKYKLKKAEVEAIIEDAVNEYKRALVEP
GEPIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPVMTVFL
DEDHRHDLEKAREVARRIEGTTIENLAREMSIDILNFEFIVELDPERLEKSGLDMERILK
KLSGSFKSAEFEADGYSLIVRPKKVTKLSDLRKLAEKVKKHRLKGLSGVGKTIIRKEGDE
YVIYTEGSNFKQVLKVPGVDPTRTRTNNIWEIADVLGIEAARNAIIEEIVNTMREQGLEV
DIRHIMLVADMMTLDGVIRPIGRHGIVGEKSSVLARAAFEITTQHLFEAAERGEVDPLNG
VVENVLIGQPVPVGTGIVRLTMSLPLRPQRE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggttgccgcgaagacgattaaaaccctcgtctggaagtccgagcttcccgataacatc
aaggaggagctctacaacaagctcatcgagtacaacaagaagtacaagctcaagaaggca
gaggtcgaggcgatcatcgaagatgccgttaacgagtacaagagggcactcgtagagcct
ggagagccgataggaacggtcgcagctcaatcgataggcgagccctcaacccagatgacc
ctcaacaccttccactacgccggtgtcgccgagataaacgtcaccctcggtctgccgagg
atcatcgagatagtcgatgcgaggaagaatccatccacccccgtcatgacggttttcctc
gacgaggatcacaggcacgacctcgagaaggcgagggaagtcgcgaggagaatagaggga
accacgatagagaacctcgcgagggagatgagcatagacatcctcaacttcgagttcatc
gttgagctcgaccccgagaggcttgagaaaagcgggcttgacatggagaggatcctcaag
aagctctccggctcgttcaagagcgccgagttcgaggcggacggatactcgctcatagtg
aggccaaagaaggtaacgaagctctcagacctcagaaagctcgccgaaaaggttaaaaag
caccgccttaaaggcctgtctggcgtcggaaagaccatcataagaaaggaaggcgacgag
tacgtcatctacaccgagggctcgaacttcaagcaggtgctcaaggttccgggcgttgac
ccaacgaggacgaggacgaacaacatctgggaaatcgcggacgtactcggcatagaggcc
gctcgcaatgctatcatcgaggaaatcgtcaacacgatgcgcgagcagggtctcgaggtc
gacatcaggcacataatgctcgtcgccgacatgatgacgctcgacggggttataaggccg
ataggaaggcacggaatagtcggcgagaagtcgagcgtcctggcgagggcggccttcgag
atcacaacgcagcacctgttcgaggccgccgagaggggagaggtcgatccgctcaacggt
gtcgttgagaacgtgctcatcggccagcccgtgccagtcggtacgggaatcgttaggctg
acaatgagtctccccctgagaccgcaaagggagtag
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