Thermococcus sp. AM4: TAM4_1541
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Entry
TAM4_1541 CDS
T01638
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tha
Thermococcus sp. AM4
Pathway
tha04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TAM4_1541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tha03019
]
TAM4_1541
03009 Ribosome biogenesis [BR:
tha03009
]
TAM4_1541
04131 Membrane trafficking [BR:
tha04131
]
TAM4_1541
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tha04147
]
TAM4_1541
Messenger RNA biogenesis [BR:
tha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TAM4_1541
Ribosome biogenesis [BR:
tha03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TAM4_1541
Membrane trafficking [BR:
tha04131
]
SNARE
SNARE associated proteins
Others
TAM4_1541
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TAM4_1541
Exosome [BR:
tha04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TAM4_1541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_22
TIP49
CDC48_2
AAA_14
AAA_5
AAA_33
nSTAND3
AAA_28
RNA_helicase
AAA_24
IstB_IS21
Mg_chelatase
Sigma54_activat
NPHP3_N
DUF815
AAA_7
AAA_18
Bac_DnaA
ATPase_2
Vps4_C
ATPase
Parvo_NS1
ABC_tran
AAA_17
NB-ARC
TsaE
AAA_3
Zeta_toxin
AAA_lid_PRS2_C
SLFN-g3_helicase
PhoH
Zot
Motif
Other DBs
NCBI-ProteinID:
EEB74174
UniProt:
B7R220
LinkDB
All DBs
Position
complement(995754..998270)
Genome browser
AA seq
838 aa
AA seq
DB search
MIFGRGEENVDEIKLRVAEALKVDVGRGIVRFDKQYQRKLGVGTGDIVELIGSRSTAAIV
ANAHPDDRGLDIIRMDGYIRKNAGVSIGDYVTVRKAQVQEAKKVVLAPAQKGVILQIPGD
IVKQNLLGRPVVKGDIVVASSRGETGYYGSPLDDLIRGLFEAMPIGFGELKFVVVSTVPK
GIVQITYNTEVEVLPQAVEVREESIPEVTYEDIGGLSDAIQKIREMVELPLKHPELFERL
GIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYGESEERLREIFKEA
EENAPSIIFIDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKGRGKVIVIAATNRPDAI
DPALRRPGRFDREIEVGVPDKQGRKEILQIHTRGMPLEPSFDKEEVLAVLEELARRGGKF
AEEVGKLKPLVEAAQSGREIKEILKGSGELYSEVKAKLIDRMLDRIADRTHGFVGADLAA
LAREAAMVVLRRLIQEGKVSPEQERIPPEVLQELRVREEDFYEALKMVEPSALREVLIEV
PNVRWDDIGGLEDVKQELREAVEWPLKYPKAFERLGITPPKGILLYGPPGTGKTLLAKAV
ANESEANFIAIRGPEVLSKWVGETEKRIREIFRKARQAAPTVVFIDEIDAIAPARGSYEG
GRHLDTLINQLLTEMDGIQENSGVVVIGATNRPDIIDPALLRPGRFDRLILVPAPDEKAR
LEIFKVHTRRVPLAEDVNLEELAKKTEGYSGADIEALVREAALIALRRAVSRLPRDVVEK
QSEEFLESLKVSRKDFEMALKKVRPSITPYMVDYYRNFEESRRRRDRGEGKGVDYYTF
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
gtgatctttggaaggggcgaggagaacgtggatgaaataaagctcagggttgcagaggcc
ctgaaggtggacgtgggcaggggaatagtcaggttcgacaagcagtaccagcggaagctc
ggcgtcggtaccggcgacatagtcgagctcataggttcgcgctcaaccgccgcgatagtg
gccaacgcccaccccgacgacaggggtctcgatataataaggatggacggttacatcagg
aagaacgccggagtaagcataggcgactacgtgacggtgaggaaggcgcaggtccaggag
gcgaagaaggtcgtcctcgcgccggcccagaagggcgtcatactccagatacccggcgac
atcgtcaagcagaacctcctcgggaggccggtcgtgaaaggggacatagtggtcgcgagc
agcaggggtgagaccggttactacggaagtccgctcgatgacctcatcaggggcctcttc
gaggccatgccgatcggcttcggcgagctgaagttcgttgtggtgagcaccgtccccaag
ggcatagtccagataacctacaacaccgaggttgaggttctcccgcaggcggttgaggtg
agggaggagagcatccccgaggttacctacgaggacatcggcggcctgagcgacgcaata
cagaagatccgcgagatggtcgagctgcccctcaagcacccggagctcttcgagaggctt
ggaatagagccgcccaagggggttctcctctacggtccgccgggaaccggtaagaccctc
ctcgccaaggcggtggcgaacgaggcaaacgcacacttcatagccatcaacgggccggag
ataatgagcaagttctacggcgagagcgaggagaggctgagggagatcttcaaggaggcc
gaggaaaacgccccgagcatcatcttcatcgatgagattgacgcgatagctccgaagagg
gaggaggttgttggagaggtcgagaagagggttgtaagccagttactcacgctgatggac
ggcctgaagggcaggggcaaggtgatagtgatagcggccaccaacaggcccgacgcgatt
gacccggctttgaggagacctggaaggtttgacagggagatagaggtcggcgttccggac
aagcagggcaggaaggagatactccagatacacaccaggggaatgccgctggagccttca
ttcgacaaggaggaagtcctcgcggtccttgaagagctcgcaaggcggggcggtaagttc
gccgaggaagttggaaaactgaagcccctcgttgaggccgcccagagcgggagggagatc
aaggagatcctgaagggaagcggcgagctctactccgaggtcaaggcgaagctgatagac
agaatgctcgacaggatagcggacagaacgcacggcttcgttggagccgacttagcggct
ctggcgagagaggcggcgatggtcgtcctcaggaggctcatccaggagggcaaggtgagc
ccggagcaggagcgcattcccccggaggttctgcaggagctcagggttcgcgaggaggac
ttctacgaggccctcaagatggtcgagccatcggcgctcagggaggttctcatagaggtt
ccaaacgtccgctgggacgacatagggggcctcgaagacgtcaagcaggagctcagggag
gcggtggagtggccgctcaagtatcccaaggccttcgagaggctcggcataaccccgccg
aagggaatactcctctacggtccgcccgggacgggtaagacgctccttgcaaaggcggtg
gcgaacgagagcgaggccaacttcatagcgattagagggccagaagtgctgagcaagtgg
gtcggcgagacagagaagaggataagggagatattccggaaggcgagacaggctgctccg
acggtcgtcttcatcgacgagatcgacgcgatagctccggcgaggggaagctacgagggc
ggaaggcacctcgacaccctgatcaatcagctgttgactgagatggatggtattcaggag
aacagtggtgtggttgtcatcggtgccaccaacaggccggacatcattgacccggccctg
ctgaggcccgggcgctttgacaggctgatactcgtgccggcaccggacgagaaggccagg
ctggagatattcaaggtgcacacgaggcgcgttcccttggcggaagatgtcaacctcgag
gagctggcaaagaaaacggaaggatattcgggagcagacatagaggccctggtcagggag
gcggcgctgatagccctcagaagggccgtttcgaggcttccaagggacgtggtggagaag
cagagcgaagagttcctggagagcctcaaggtttcgaggaaggacttcgagatggctctc
aagaaggtcaggcccagcataacgccctacatggtcgattactaccggaacttcgaggag
agcaggaggagaagggacaggggagagggcaagggagtggactactacaccttctga
DBGET
integrated database retrieval system
