Thermococcus sp. AM4: TAM4_1567
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Entry
TAM4_1567 CDS
T01638
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tha
Thermococcus sp. AM4
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tha03400
]
TAM4_1567
DNA repair and recombination proteins [BR:
tha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TAM4_1567
Archaeal homologous recombinant proteins
TAM4_1567
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_15
SMC_N
AAA_27
AAA_21
Rad50_zn_hook
AAA_29
ABC_tran
COG3_N
Med9
SbcC_Walker_B
DUF724
TRIM_CC
VRR_NUC
AAA_16
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
EEB74200
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Position
complement(1026183..1028840)
Genome browser
AA seq
885 aa
AA seq
DB search
MRVRKIEIRNFRAHRKSVVEFSDGINLIIGQNGAGKSSILEAIFASLYLGHPSFPKGYLK
ANARVGTGELSLSLEFEHNGKTYRITRTTKKSELLENGRLIAEKSSDIARWVERNVYPLQ
IYTNALYIRQGEIEGIITNREVMEKVLRKVLGIEDYENAERNSADVIRELKRRKENLKRL
IERKAEIEENLRDAEKRFAETLRKISELRKRERELSAEVEKLSKLYQEMKERKELITSLE
KRIALLEKSLASEEKLLREREKRIGELKLELEELEEKKARLEELKPLAEEYTELGRLLKL
KDELSKVEVGLSSLREKLRSLERETAKRAELEKKLEELKKKEAETRREYERLKERHRLYQ
RALSILGEAEKHRKELERAGYTVEKLEKELKEIEEAKEELEKLQEEISKVREKIASLKGK
KAELMANMERLEGAKICPLCRRPIDEHEEGEILAEYRAEISRIEGEVKTLEEELEGLKKR
EVELRKLLAKEPKLIRLKKTADLLREAEEKLEELGVEELERDAELFEETKEKLIGLKKEI
RGVRERLEELEGLEKEKEEVEKELHALEERKADILKRLSERGFKSFEEVEERIGELEKPY
REFLSLKDVPRRIEVLERKLDVERRKADESRANMERLKAELGKAREELEEAREDFSEEDF
ERAEREYLEKSRVLERARAEREGAESLRDEIARLIDELKANLWEIEKAEKELELVEKALS
DITAFREKIARLKAEEELRGLEEVQKLAGELFSEMTEGKYQGIRLRREKKYGKERIELKV
LYAGNEVGIDFLSGGERIALGLAFRLALSLYKVGNLELLILDEPTPFLDEERRKKLVEII
SSQLRKIPQVIIVSHDEELKDAADYVIRVTNAGEARVEVESLGAY
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcaggaaaatcgagattcggaacttcagggcccacaggaaaagcgttgtcgag
ttcagcgacggcataaacctgataatcggccagaatggagcgggaaagagctcaatcctt
gaggccatcttcgcctcgctttacctcggacacccgagcttcccgaagggttacctgaag
gccaacgctcgcgtcggaaccggtgagctttccctgagcctggaattcgagcacaacggc
aaaacctaccgcataaccagaacaacgaagaagagcgagctcctcgagaacggacggctc
atcgcggagaagagctcagatatagcgcgctgggtcgagcggaacgtttaccccctgcag
atctacacgaacgcgctctacattcgacagggcgagattgagggcataatcaccaaccgc
gaggtcatggagaaggttctgcgcaaggttctcggcatagaggactacgagaacgccgag
aggaactcggccgatgtaatccgcgagctgaagaggaggaaggagaacctcaagaggctc
atcgagaggaaagccgaaatcgaggagaacctcagggatgccgagaagaggtttgccgag
acgctgagaaagattagcgagctgaggaagagggaaagggagctttcggccgaggtggag
aagctttccaagctctatcaagagatgaaggagaggaaagagctgataaccagccttgag
aagaggatagctctcctcgaaaaatcgctggcgagcgaggagaaacttttgagggagagg
gagaagaggataggggagctgaagctcgagctcgaggagctggaggagaagaaggcgaga
ctcgaggagctgaagcccctcgcagaggaatacaccgagctcggcagacttctcaaactg
aaggacgagctttcgaaggttgaggttgggctttcctcgctgagggagaagctccgctcc
ctcgagagggaaacggcgaagcgtgctgagctggagaaaaagcttgaggagctgaagaag
aaagaggctgagacgaggagggaatacgagaggctcaaggagaggcacaggctctaccag
cgtgccctgtcaatcctcggtgaggccgagaagcacaggaaggaactcgagagggccggc
tacaccgtcgagaagcttgagaaggaactcaaagaaatcgaggaagccaaggaggagctt
gaaaaactccaggaggagatttcgaaggtcagggagaagatagcctcgctgaaggggaaa
aaggcggagcttatggccaacatggagaggctggaaggggccaaaatctgccccctttgc
agaaggcccatagacgagcacgaggaaggcgaaatcttggcagaatacagggctgagata
tcgaggattgagggggaagttaaaacccttgaggaggaactcgaagggctgaaaaagcgc
gaggttgagctcaggaagctcctcgcgaaagagccaaagctaatccgcctcaagaagacg
gccgatttgctcagggaggcggaggaaaagcttgaggagctcggcgttgaggagcttgag
agggacgccgaactcttcgaggaaacgaaggagaaactcatcggtctcaagaaggaaatc
cggggcgtgagggagaggcttgaggagcttgagggccttgagaaggaaaaggaagaagta
gagaaggaacttcacgccctcgaggagagaaaggctgacattctaaagaggctctccgag
agggggtttaagtccttcgaggaggttgaggagaggattggggagctcgagaagccctac
cgcgagttcctctcgctgaaggacgttccaaggaggattgaggtcctcgagaggaagctc
gacgtcgagcggaggaaggccgatgaatcaagggcgaacatggagcgcctgaaggccgag
ctcggaaaggcgagagaagagctggaggaagccagagaggacttctcggaggaggacttc
gagagggccgagagggaataccttgagaaatcgagagtccttgagagggcgagggccgag
cgtgaaggggcggaaagcctgagggacgagatagctcgcttaatagacgagctgaaggcg
aacctctgggagattgaaaaggccgagaaagagctcgagctcgtcgagaaggccctctcg
gatataacggccttcagggagaagatagcccggctgaaggcggaggaagagctgaggggc
cttgaagaggtgcagaagctggccggagagctgttctcggagatgaccgagggcaagtat
caggggataaggctgaggcgcgagaagaagtacggaaaggagaggattgagctcaaagtc
ctctacgcgggcaacgaggtgggaatagacttcctcagcggtggggagagaatagcgctc
ggtctggccttccgccttgccctctcgctctacaaggtgggcaaccttgagctcctcata
ctggacgagccgacgccattcctcgacgaggagaggaggaagaagctcgtggagattata
tcaagccagctgaggaagataccgcaggtaatcatcgtctctcacgacgaagagctgaag
gacgcggccgactacgtgataagggttaccaacgccggtgaagcaagggtggaggtggag
agccttggagcgtattga
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