Thermococcus sp. AM4: TAM4_1722
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Entry
TAM4_1722 CDS
T01638
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tha
Thermococcus sp. AM4
Pathway
tha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TAM4_1722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tha03021
]
TAM4_1722
Enzymes [BR:
tha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TAM4_1722
Transcription machinery [BR:
tha03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TAM4_1722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
Auto_anti-p27
DUF5817
RUBY_RBDX
Zn_ribbon_NOB1
RNA_pol_Rpb2_45
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
EEB74355
LinkDB
All DBs
Position
1083141..1086509
Genome browser
AA seq
1122 aa
AA seq
DB search
MSARGVTVVDVTPDDLWIVMESYWKEKGLVRQHLDSYNAFIEHGLQEVINEFGGVKPDIP
NFEVKFGKIRLGEPIFQEAQGQRRPLYPMDARIRNLTYSAPLFLELIPVVNGIEQEPVEV
RIGELPLMLKSKACRLYGLSDEELIELGEDPKDPGGYFIINGSERVIVSIEDLAPNKTLV
ERDERQNKVVAKVFSYRHGYRALITVESRKDGILYVSIPNVPKPVKFVYVMRALGLLSDK
EIVEAISEDPRIQQVLFNNLEDASDIRTQEEALDFIGRLSLPGQPKEYRLRRAEHIIDNN
LLPHMGVEPENRKAKAYYLGMMALKVLELALGLRGEDDKDHYANKRLKLAGDLLKDLFRV
AFGQLVKDMQYQMTKTYQRKGERYTFENIQRFVRNSVRPDVLSERIEHALATGSWPGGRT
GVSQLLDRTNYISTLSHLRRVTSPLSRDQPHFEARDLHGTHWGRICPTETPEGPNCGLVK
NLALMAQITTGIPEEEVREYLLKLGVVPIEERRPSPGLYRVYLNGVLIGTIEDGKALVQT
IRSDRRAGKISDVINVAIYEEEDVREIYVNSDDGRVRRPLIIVENGKPKLTREHVEAIKN
GQLEWSDLIRMGVIEYLDAEEEENAYVATWPWEVTEEHTHLELMPAAILGIPASLVPYPE
HNAAPRNTYGAGMAKQSLGLGWANFRIRVDTRGHLMHYPQVPLVNSRIMKAVGFEERPAG
QNFVVAVLSYQGYNMEDAIIINKASIERGLARSTFFRTYEAEEKRYLGGQMDRFEKPDPT
IKGYLGDRYYRNLDEDGIIFPESKVEGKDVLVGRTSPPRFLEEQSGLGGIALQERRETSV
AVRPSEKGIVDKVIITETGDGTKLVKVTVRDLRIPELGDKFASRHGQKGVIGLIVPQEDM
PWTENGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVASLKGRRVDGTAFIGEPEERLRKEL
EELGFKHTGREVMYDGITGRRLEADIFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPT
EGRAREGGLRFGEMERDVLVGHGAAMLLIERLLEESDKTEVWVCENCGHIALEDKRRGKV
YCPVCGEEERISKVEMSYAFKLLLDELKAMVIRPSLRLKDRV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagaggagttactgtggttgatgtcactcccgacgatctctggattgttatg
gagtcgtactggaaggaaaagggtctcgtcagacagcacctcgattcttacaacgccttc
atcgagcacggccttcaggaggtcataaacgagttcggcggcgtcaaaccggacatcccc
aacttcgaggtgaagttcggaaagatacgcctcggcgagccgatcttccaggaggcccag
gggcagaggagacccctttacccgatggacgcgaggataagaaacctcacatactccgcc
ccgctgttccttgagctgattcccgttgtaaacggcatagagcaggaacccgttgaggtc
cgcattggagaactccccctcatgctgaagtcaaaagcctgcaggctctacggcctcagc
gacgaggagttaattgagctcggcgaggacccgaaggacccgggaggatacttcatcatc
aacggttcggagagggttatcgtttctatcgaggatttggctccgaacaagaccctcgtt
gagagggacgagaggcagaacaaggtggttgccaaggtcttctcgtacaggcacggttac
agggccctgataacggtcgagagcagaaaggacggcatcctttacgtttctatcccgaac
gttccaaagccggtcaagttcgtctacgtgatgcgcgccctcggtctcctcagcgataag
gagatcgtcgaggccataagcgaggacccgaggatccagcaggttctcttcaacaacctc
gaggacgcgagcgacataagaacgcaggaggaagcccttgacttcattggaaggctctcc
ctgccgggccagccgaaggagtaccggctaaggagggccgagcacatcatagacaacaac
ctcctcccgcacatgggcgttgagccagagaacaggaaggccaaagcctactacctcggc
atgatggccctcaaggtcctcgaactggccctcggcctgcgcggtgaggacgacaaggat
cactacgccaacaagaggcttaagctggctggagacctcctcaaggacctcttccgcgtc
gccttcggacagctcgtcaaggacatgcagtaccagatgacgaagacgtaccagaggaag
ggcgagcgctacaccttcgagaacatccagcgcttcgtgaggaactcggtcagaccggac
gttctgagcgagagaattgagcacgccttagccaccggctcctggccgggcggaagaacc
ggtgtgagccagcttttggataggacaaactacatctcgaccctctcgcacctcaggcgc
gtaacttcaccgctcagcagagaccagccccacttcgaggcgagagatctgcacggaacc
cactggggcaggatctgtcccaccgagacgccggaaggcccgaactgtggtctggttaag
aacttggctttgatggcccagataaccaccggaattcccgaggaggaagtcagggagtac
ctcctcaagctcggcgtcgttccgatagaggagagaagaccctcacccggactttaccgt
gtctacctcaacggagttctcatagggacgatagaggacggaaaagccctcgtccagacc
ataaggtccgacagaagggcaggaaagataagcgacgtgatcaacgtcgccatctatgag
gaggaggacgtgagggaaatatacgtcaacagcgacgacggcagggttaggagacccctg
atcatagtggaaaacggcaaaccaaagctcacccgcgagcacgtcgaggcgataaagaac
ggtcagctcgagtggagcgacctgataaggatgggcgttattgagtacctcgacgctgag
gaagaggagaacgcctacgtggcaacctggccctgggaggtaactgaagagcacacccac
ctcgagctcatgccggccgcgatactcggaataccggcttcgctcgttccatacccggag
cacaacgcggccccgcgtaacacctacggcgctggtatggccaagcagagcctcggtctc
ggctgggccaacttcaggattagagttgacacccgcggtcacctcatgcactatccccag
gttccgctcgtcaactcgcgcataatgaaagccgtcggtttcgaggagaggccggccggc
cagaacttcgtcgttgcggtgctcagctatcagggctacaacatggaggatgcaatcata
ataaacaaggcctcaatcgagcgcggtctcgcgaggtcgacgttcttcaggacgtacgag
gccgaggagaagagatatctcggcggtcagatggaccgctttgaaaagcccgacccgacg
atcaagggctacctcggcgacaggtactaccgcaacctcgacgaggacggcataatcttc
ccagagtcaaaggtcgaaggaaaggacgttctcgtcggcagaacttcacctccgaggttc
cttgaggagcagagcggcctcgggggaatagccctccaggagagaagggaaaccagcgtc
gcggtgaggccgagcgagaagggtatagtcgacaaggtcataataaccgagaccggcgac
ggaaccaagctcgtcaaggttaccgttagggacctgcgcattccggaactgggtgacaag
ttcgcatcaaggcacggacagaagggtgttatcggtttgatcgtcccgcaggaggacatg
ccctggactgagaacggaatagtgcccgatctgatagtgaacccgcacggtattccgagc
cgtatgaccgtcggacagctcatagaggccataggcggaaaggtcgcctcactcaaggga
aggcgcgttgacggaaccgctttcatcggtgagccagaggagaggctcaggaaggagctc
gaagagctcggtttcaagcacaccggcagggaggtcatgtacgacggcataaccggaagg
agacttgaggcggacatattcgtcggcgttatctactaccagaggctccaccacatggtt
gccgacaagatgcacgcgcgctcaaggggtccggttcaggttctcaccaagcagccgacc
gagggaagggctcgcgaaggcggtctcaggttcggtgagatggagcgtgacgtcctcgtc
gggcacggcgctgcgatgctgctcatcgagaggttgcttgaagagagcgacaaaacggag
gtatgggtctgcgagaactgcggccatatagcccttgaggacaagcgtcgcggcaaggtc
tactgcccggtctgcggtgaggaggagaggataagcaaggtcgagatgagctacgcgttt
aaactgctcctcgacgagctgaaggcgatggttattaggccctccctcaggttgaaggat
agggtgtga
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