Thermococcus sp. AM4: TAM4_1809
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Entry
TAM4_1809 CDS
T01638
Name
(GenBank) bipolar DNA helicase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tha
Thermococcus sp. AM4
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tha03400
]
TAM4_1809
DNA repair and recombination proteins [BR:
tha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
TAM4_1809
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
DUF3846
Motif
Other DBs
NCBI-ProteinID:
EEB74442
UniProt:
B7R254
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All DBs
Position
complement(1030247..1031914)
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AA seq
555 aa
AA seq
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MEGRDASVGIVFGESSTDHFTFIVNPKNELPRFGEFLVVKNREGDEVLALLKSIRNLNWL
MEAGRGSYDYVEKTVNVFSRGILDKSEEILANAKVLGVLRTRDGEFMVKPAPNRVPIKPG
ERVYLARDEDLERIFANGHLRIGKLIARANIEVRLDANRLVSRHFAVLAVTGAGKSNTIA
VLTKELVDNVNATVVILDPHGEYQRLSWPGARVNPIKATIDPGRIRLSELATLLGIAENA
SLQRRFLGLIYRTVKEEMRRDGKVVGGLPFLEAMEDKIEEWIRVYENTDDKVIYYYNEKG
IETPRKIQARDLDSLIRLKDYIGELKANFGEFISPVDVLGEIRPGMVNVIDLSGMEEEQM
ITLASFVLRGILKNRIEYIKAVRTSDRLTAREILEAYPAVKKPILVIVEEAHIFAPRGEK
NPATLWLGKIAREGRKFGVGLGIVSQRPKKLDDDILSQTNTKIILKLVEPNDQRYVQQAS
EQISEDLLSDIASLGVGEAVIVGYAITIPAMVKIYNFEKDFNGHYGGRDIDIVEEWLDGK
EEEVSEEEAISALPL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcgcgacgcttcggttggaatagtgttcggtgaatcgagcaccgaccacttc
acgttcatagtcaaccccaagaacgagctcccgcgcttcggggagttcctcgtcgtcaaa
aaccgcgagggagacgaggttttggctctcctcaagtccatcagaaacctcaactggctt
atggaagccggaaggggaagctacgactacgttgaaaaaaccgtcaacgttttctcgcgc
ggaatcctcgacaagagcgaggagatattagctaatgccaaggttctcggcgttctcaga
acgagggacggcgagtttatggtaaagcccgcccccaaccgcgtccccataaagccgggc
gagagagtttatctggccagagacgaggacttggagagaatcttcgccaacgggcacctc
agaattggaaagctcatcgcgagggccaacatagaggtccgcctcgacgccaacaggctc
gtttcaagacacttcgcggtcttggccgttaccggagccggtaaatccaataccatagcg
gttctcaccaaggagctcgtggacaacgtgaacgcgaccgtcgttatcctcgacccccac
ggcgagtatcagaggttgagctggcccggggcgcgcgtcaacccgataaaggccacgata
gaccccggaaggataaggctgagcgagctggcaacgcttctcggcatagccgaaaacgcg
agccttcagaggcgcttcctcgggctgatttataggacggtcaaggaggagatgagaagg
gacggaaaggtcgtcggtggtctgccattccttgaggcgatggaggacaagatagaggag
tggatacgcgtttacgagaacaccgacgacaaggtaatctactactacaacgagaagggc
atagagacgccgaggaagattcaggcgagggatttggactccctgataaggctgaaggac
tacataggcgagctgaaggccaacttcggcgagttcataagcccggtagatgtgctcggc
gagataaggcccggcatggtgaacgtcatagacctcagcggaatggaagaggagcagatg
ataacgctcgcgagcttcgttttgaggggaatcctcaagaaccgcatcgagtacatcaaa
gccgtcagaacgagcgacaggctcaccgcgagggagatactggaagcttacccggccgtg
aagaagccaattctcgtcatagttgaggaggcacacatattcgctccacggggtgagaag
aaccccgcaaccctgtggctcggcaagatagcgcgagagggcaggaagttcggggttggt
ttgggcatagtgtcccagaggccgaagaagctggacgacgacatactcagccagaccaac
accaagataatcctcaagctggttgagcccaacgaccagcgctacgtccagcaggcgagt
gagcagataagcgaggacctgctgagcgatatagcctccctcggcgtcggtgaagcggtt
atagtcggctacgccatcacgattccggcgatggtgaagatttataacttcgagaaggat
ttcaacggccactatggaggaagggacatagatatcgtcgaggagtggctcgatgggaag
gaggaagaggttagcgaggaagaggccataagcgccctcccgctgtga
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