Thermococcus sp. AM4: TAM4_257
Help
Entry
TAM4_257 CDS
T01638
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tha
Thermococcus sp. AM4
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tha03016
]
TAM4_257
Enzymes [BR:
tha01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TAM4_257
Transfer RNA biogenesis [BR:
tha03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
TAM4_257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
EEB73969
LinkDB
All DBs
Position
1355539..1356045
Genome browser
AA seq
168 aa
AA seq
DB search
MIVFYLSGDRVFSTDQNAINGLYNKRHFGKLVEGKLFLSLLEATYLVERGKIEVRDGKRK
LTVEELMNLGRKRDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGMDEHSQWLVW
VLPENSRLSPNDITARVRVAHGVRKNMVMAIVDEDADVTYYKVEWTKF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcttttacctgagcggggacagggtcttctcgaccgaccagaacgcgataaac
ggcctctacaacaagcgccacttcgggaagctggtggagggcaagctcttcctctcgttg
ctcgaggcaacttatctcgtcgagaggggcaagatagaggtcagggacgggaagagaaaa
ctaaccgtcgaggagctcatgaacctcggaaggaagagggacgagctgttcgacgccaag
tatctcgtttacaaggacctgcgcgacaggggctacaccgtcaagtccggccttaagttc
ggctcgcacttccgcgtttaccgcaggggcatggacgagcactcccagtggctcgtgtgg
gtcctacctgagaactcccgcctgagcccgaacgacataaccgctcgcgttagagtagct
cacggtgtcaggaaaaacatggtgatggcgatagttgacgaagatgcggacgttacctac
tacaaggtagagtggactaagttttag
DBGET
integrated database retrieval system
