KEGG   Thermococcus sp. AM4: TAM4_294
Entry
TAM4_294          CDS       T01638                                 
Name
(GenBank) Replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
tha  Thermococcus sp. AM4
Pathway
tha03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TAM4_294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tha03032]
    TAM4_294
DNA replication proteins [BR:tha03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     TAM4_294
SSDB
Motif
Pfam: LAGLIDADG_3 Rep_fac_C Intein_splicing AAA DNA_pol3_delta2 HTH_3 RCF1-5-like_lid RuvB_N AAA_assoc_2 Mg_chelatase Rad17 HTH_19 PT-HINT dnstrm_HI1420 MeaB DNAX_ATPase_lid TPR_7
Other DBs
NCBI-ProteinID: EEB74006
UniProt: B7R2J0
LinkDB
Position
1362224..1364836
AA seq 870 aa
MGEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYAKTGSMPHLLFAGPPGVGKC
LTGDAKVVINGELTTIGELVERLSNGRFGPTPVKGLTVLGVDEDGKLRELPVEYVYKDRT
DELVRIKTRLGRELKVTSYHPLLVNRKDGRIEWVKAEELRPGDRLAVPRFLPAILDEDPL
AEWLGYFIGDGHADAQTNAITFTNTDEKLRKRFMELTERLFPDARIKERIHKDRAPDVYV
NSKMTKELVESLGLAGRKADRVYIPGQGWKGLRSFLRAYFDCDAGVEKNGIVLSTASREM
AEQVSYALAGLGVVAKVRSKAVKGCTYYYVVISGSENISRFLREAGFSVEEKRRKAEALV
KKPNPNIGSLYADRELISYVRDRLKLNFYDDKARWSPEKAKRIAWELMKEIYYRLDELEK
LEKALSRSILVDWNEVARRRKEIAEKTGIRHDRLLEYIKGKRKPSLRNYLKIAGALGIQL
EETIEAMRTFARKYSSYAEIGRLVGTWNSSVRIVLESNTEKIEALEEIRKAELKLLREIL
NDEKLKRGVAYLIFLAQNELLWDEIVEVEKLKGDFVIYDLHVPGYHNFIGGNLPTVLHNT
TAALALARELFGENWRHNFLELNASDERGINVIREKVKEFARTKPVAGASFKIIFLDEAD
ALTQDAQQALRRTMEMFSNNVRFILSCNYSSKIIEPIQSRCAIFRFRPLNDEDIAKRIKY
IAEQEGLELTEEGLQAILYVAEGDLRRAINVLQAAAALDKKITDENVFLVASRARPEDVR
EMMTLALEGNFLKAREKLREVLLKQGLSGEDVLIQMHKEVFNLPIPEDKKVALADKIGEY
NFRLVEGANEMIQLEALLAQFTIMGDKKGK
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgggggaggaaattagagaggttaaggttctcgagaagccctgggttgaaaagtaccgc
cctcagaggctcgatgacatcgttggtcaggagcacatagtcaagaggctcaaacactac
gctaaaaccggttcgatgccccacctgctcttcgctggaccgcccggcgttggaaagtgc
cttacgggagacgccaaggtcgtaatcaacggtgagctgaccaccataggtgaactcgtc
gagaggctgagcaacggtagatttggtccaacccccgtcaagggcctaacggttctcggc
gttgacgaggacggaaaactcagggagttgccagtcgagtacgtttacaaggacagaacc
gatgagcttgtcaggataaaaacaagactcggcagggagctcaaggtaacctcgtaccac
ccgctcctcgtgaacaggaaggacgggagaatagagtgggtcaaggccgaggagctcagg
cccggggacaggttggcagttccgcgcttcctcccggcgattctcgatgaggaccccctg
gctgagtggctcggctacttcatcggtgatggccatgctgacgcccaaacaaacgccata
accttcactaacacggacgagaagctcagaaagcgcttcatggagctcaccgaaaggctc
ttcccggacgcgagaattaaggagagaatccataaggaccgtgcccctgacgtttacgtg
aactcaaagatgacaaaggaactcgttgagagcctcggcctcgccggcaggaaggcggat
agggtttacatacccgggcagggctggaagggcctgcgctccttcctcagggcctacttc
gactgcgacgcgggcgttgagaagaacgggatagttctctcgaccgcaagcagggagatg
gcggagcaggtctcttacgcgttggcggggcttggagtggtcgccaaagtgaggagcaag
gccgtcaaaggatgcacctactactacgtcgtcatctcgggctccgagaacatatcgcgc
ttcctcagggaggccggcttctcggtcgaggagaagaggaggaaggctgaggcgttggtg
aagaagccgaaccccaacatcggctcgctctacgctgacagggaactgatttcctacgtc
agggacaggctcaagctgaacttctacgatgacaaggcccggtggagcccggagaaggcc
aagaggatagcctgggagctgatgaaggaaatctactaccgccttgacgagctcgaaaag
cttgaaaaggccctgtcgaggagcatcctcgtagactggaacgaggtcgcgaggagaaga
aaggagatagctgagaagaccggtataaggcatgacagacttcttgaatacattaagggc
aagcggaagccgagcctgaggaactaccttaagattgctggtgcccttggaattcagctg
gaagaaacgatagaagccatgcgcacctttgcgaggaagtactcaagctatgccgagatt
ggaaggctcgtcggaacttggaactcaagcgtgaggattgtccttgagagcaacaccgag
aagatagaggcccttgaggagattagaaaggccgagctgaagcttttaagggagatactc
aacgacgaaaagctcaaaaggggtgtcgcttacctgatattcctcgcccagaacgagctc
ctctgggatgagatagttgaggtcgagaagcttaagggtgacttcgtaatctatgacctc
catgtgcccggttaccacaacttcataggcggcaaccttccgacggttctccacaacaca
acggccgctctagcccttgctagggagttattcggcgaaaactggcgccacaacttccta
gagctcaacgcgagcgatgagagaggcataaacgtgattagggagaaggtcaaggagttc
gcccgcaccaaacccgtcgcgggagcgagcttcaagataatcttcctcgacgaggccgac
gccctgacccaggacgcccagcaggccttgaggagaacgatggagatgttctccaacaac
gttcgctttatcctcagctgtaactactcctcaaagataatcgaacctatacaatcaaga
tgtgccatcttccgcttcaggcccctcaacgacgaggacatagcgaagcgcataaaatac
atcgccgagcaggaggggcttgagctcaccgaagaaggcttacaggcgattctctacgta
gcggaaggcgatttgaggagggcaatcaacgtcctccaggctgctgccgctctggacaag
aagataaccgatgagaacgtcttcctagttgccagcagggcccgccccgaggacgttcgc
gagatgatgaccttagcgttggagggcaacttcctgaaggcgagggagaagctgagggag
gtcctcctcaagcagggcctcagcggtgaggacgtgctgattcagatgcacaaggaggtc
ttcaacctgccgattcccgaagacaagaaggtcgctctggcggacaagataggcgagtac
aatttcaggctcgttgaaggggccaacgagatgatacagctcgaggcgttgctcgctcag
ttcacgattatgggcgacaagaagggcaagtga

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