Thermococcus sp. AM4: TAM4_56
Help
Entry
TAM4_56 CDS
T01638
Name
(GenBank) Uracil-DNA glycosylase family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tha
Thermococcus sp. AM4
Pathway
tha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TAM4_56
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tha03400
]
TAM4_56
Enzymes [BR:
tha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TAM4_56
DNA repair and recombination proteins [BR:
tha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TAM4_56
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
EEB73768
UniProt:
B7R2V4
LinkDB
All DBs
Position
1253372..1253956
Genome browser
AA seq
194 aa
AA seq
DB search
MGKEELMKKLEERIRNCRKCPLGQLRTNAVPGSGSYDAKVMFVGEAPGYWEDQKGLPFVG
RAGKVLDELLAGIGLSRDDVYITNIVKCRPPENRNPTEEEIRACSPYLDMQIDIIRPRVI
VPLGRHSMGYILRKFGFEPEPISKIHGKVFRANTLFGRILIMPMYHPAAALYKPPLREEL
RKDFEKLGKILNEL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaagagctcatgaaaaagctggaggagaggatcaggaactgccggaagtgt
cccctgggccagctcaggaccaacgccgttcccggctccggaagctacgacgccaaggtc
atgttcgttggggaagccccgggttactgggaggatcagaagggccttcccttcgtcggc
agggcaggaaaggttctcgacgagctcttggcgggaatagggctcagcagggacgacgtc
tacataacgaacatcgtcaagtgccgcccaccggagaaccgcaacccaacggaagaggag
ataagggcctgctccccctacctcgacatgcagatagacatcataaggcccagggtgata
gttcccctcgggaggcactcaatgggctacatccttaggaagttcggattcgagccggaa
ccgataagcaagatccacgggaaggttttcagggccaacaccctcttcggaaggatcctc
ataatgcccatgtaccatccagcggcggccctctacaagcctcccctcagggaagagctg
agaaaggactttgaaaagctggggaagatcctgaacgagctctaa
DBGET
integrated database retrieval system
