Thermococcus sp. AM4: TAM4_731
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Entry
TAM4_731 CDS
T01638
Name
(GenBank) Uracil-DNA glycosylase family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tha
Thermococcus sp. AM4
Pathway
tha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TAM4_731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tha03400
]
TAM4_731
Enzymes [BR:
tha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TAM4_731
DNA repair and recombination proteins [BR:
tha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TAM4_731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Prolactin_RP
Motif
Other DBs
NCBI-ProteinID:
EEB74786
UniProt:
B7R158
LinkDB
All DBs
Position
1959336..1960082
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AA seq
248 aa
AA seq
DB search
MLIRIGELRRVGDVYVNPGNLLARPLSLKTWRDFLSLDEKTYGTYARTIYNPKERFLVTD
ESSEARAIELSALYCSLLTDPEYFCGRENLRYQLQVGEFDGLPFANGWTGSRVVLVGEAP
GRRGCGKTGVCFYRDASGSLLRKVLFHLGINPDFVYITNVVKCNPPSNRLSRVPEGAYEL
LARELEILEPEAVFALGRTAERALRELGFEVEYLRHPAWYVRRGVREPNDEMLAEYAKIR
EAFGGWTP
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcgaattggtgagcttcggagggtcggcgacgtctacgttaacccgggaaac
cttctggccaggccactttcgctgaaaacctggcgcgatttcctgagtctggatgagaaa
acctacggaacctacgcccggacgatttacaaccctaaggaaaggtttttggtgaccgat
gagtcctctgaggcccgggcgatagagctttctgccctatactgctcccttctgacggac
cccgagtacttctgtggtagagagaacctgcgctaccagctccaggtcggcgagttcgat
ggactgccctttgccaacggctggacgggttccagggtcgtcctcgtgggcgaagcgccg
ggaaggagaggttgcggaaaaaccggcgtgtgcttctaccgcgacgcctccggaagctta
ctcaggaaggttctctttcacctcggcatcaacccggacttcgtttacataaccaacgtc
gtgaagtgcaaccctccgagcaacaggctgtcccgcgttccagaaggcgcctacgagctc
ctcgcgagggaactcgaaatcctcgagccggaagccgtctttgccctcggcagaaccgcc
gaaagggccttgagggagctcggctttgaggtggagtacctgagacatccggcctggtac
gtgcgtcgcggagtccgcgagccgaatgatgagatgctcgccgagtacgctaaaatcagg
gaggccttcgggggatggacgccctaa
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integrated database retrieval system
