Thermococcus sp. AM4: TAM4_769
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Entry
TAM4_769 CDS
T01638
Name
(GenBank) Translation elongation factor EF-1 alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
tha
Thermococcus sp. AM4
Pathway
tha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TAM4_769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tha03019
]
TAM4_769
03016 Transfer RNA biogenesis [BR:
tha03016
]
TAM4_769
03012 Translation factors [BR:
tha03012
]
TAM4_769
04131 Membrane trafficking [BR:
tha04131
]
TAM4_769
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tha04147
]
TAM4_769
Messenger RNA biogenesis [BR:
tha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
TAM4_769
Transfer RNA biogenesis [BR:
tha03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
TAM4_769
Translation factors [BR:
tha03012
]
Eukaryotic type
Elongation factors
TAM4_769
Membrane trafficking [BR:
tha04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
TAM4_769
Exosome [BR:
tha04147
]
Exosomal proteins
Proteins found in most exosomes
TAM4_769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
FeoB_N
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
EEB74824
UniProt:
B7R0U1
LinkDB
All DBs
Position
349086..350372
Genome browser
AA seq
428 aa
AA seq
DB search
MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFEEMGEKGKSFKFAWVMDR
LKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLIVAATDGV
MPQTKEHAFLARTLGINHIIVAINKMDMVNYDQKAFEKVKAQVEKLLKMLGYKDFPVIPI
SAWEGDNVVKKSDKMPWYKGPTLIEALDQIPEPPKPTDKPLRIPIQDVYSIKGVGTVPVG
RVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVGKND
IKRGDVAGHTTNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLA
KLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGM
VISIQKAE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggagaagccacacgttaatatagtctttataggccacgtcgaccacggaaag
agcaccaccatcggaaggctgctcttcgacaccgccaacataccggagaacatcatcaag
aagttcgaggagatgggtgagaagggtaagtccttcaagttcgcctgggtcatggacagg
ctcaaggaggagcgcgagaggggtatcaccatcgacgtcgcccacaccaagttcgagacc
ccgcacaggtacatcaccatcatcgacgctccgggccacagggacttcgttaagaacatg
attaccggtgccagccaggccgacgctgccgttctcatcgtcgctgccaccgacggtgtc
atgccccagaccaaggagcacgccttccttgccaggaccctcggtatcaaccacataatc
gtggccatcaacaagatggacatggttaactacgaccagaaggccttcgagaaggtcaag
gcccaggtcgagaagctcctcaagatgctcggctacaaggacttcccggtcatcccgatc
agcgcttgggagggcgacaacgtcgtcaagaagagcgacaagatgccctggtacaagggt
ccgaccctcatcgaggccctcgaccagatacccgagccgccgaagccgaccgacaagccg
ctccgcatcccgatccaggacgtctactcaatcaagggtgtcggtaccgttccggtcggc
cgtgtcgagaccggtgtcctccgcgttggagacgtcgtcatcttcgagccggcctcaacg
atcttccacaagcccatccagggtgaggtcaagtccatcgagatgcaccacgagccgctc
caggaagcccttccgggtgacaacatcggattcaacgtccgtggcgttggtaagaacgac
ataaagcgcggtgacgtcgccggacacaccaccaacccgccgaccgtcgtcaggccgaag
gacaccttcaaggcccagatcatcgtcctcaaccacccgaccgccattaccgtcggctac
accccggtcctccacgcccacaccacccaggtcgccgtcaggttcgagcagctcctcgcc
aagctcgacccgaggactggaaacatcgtcgaggagaacccgcagttcatcaagaccggt
gactccgccatcgtcatcctcaggccgaccaaggccatggtcatcgagccggtcaaggag
atcccgcagatgggccgcttcgccatccgtgacatgggccagaccgtcgctgctggtatg
gttatctccatccagaaggccgagtga
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