KEGG   Thalassococcus sp. S3: CFI11_00855
Entry
CFI11_00855       CDS       T05844                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
thaa  Thalassococcus sp. S3
Brite
KEGG Orthology (KO) [BR:thaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thaa03032]
    CFI11_00855
   03036 Chromosome and associated proteins [BR:thaa03036]
    CFI11_00855
   03400 DNA repair and recombination proteins [BR:thaa03400]
    CFI11_00855
DNA replication proteins [BR:thaa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CFI11_00855
Chromosome and associated proteins [BR:thaa03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CFI11_00855
DNA repair and recombination proteins [BR:thaa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CFI11_00855
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_2 HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: QBF29766
UniProt: A0A4P6MBP1
LinkDB
Position
163540..163827
AA seq 95 aa
MAKPMTKTQLVAALAEEMGTDKKGASAALDAMTSLITREVAAGGAVTLPGVGKIYCRERP
ERMVRNPATGEQFKKEADKVVKMTIAKALKDSVNG
NT seq 288 nt   +upstreamnt  +downstreamnt
atggcaaaacccatgaccaaaacccaactcgtcgccgcactggccgaagaaatgggcacg
gacaagaaaggcgcaagcgcagcgcttgatgcaatgacctcgctgatcacccgcgaagtg
gcagctggcggcgcggtaaccctgccgggcgttggcaagatctattgccgcgaacgcccc
gagcgtatggttcgcaacccggccaccggtgagcagttcaagaaggaagcggacaaggtg
gtcaaaatgaccattgccaaagcgctgaaggacagcgtgaacggctga

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