Thalassococcus sp. S3: CFI11_00995
Help
Entry
CFI11_00995 CDS
T05844
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFI11_00995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thaa03400
]
CFI11_00995
Enzymes [BR:
thaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFI11_00995
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFI11_00995
DNA repair and recombination proteins [BR:
thaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFI11_00995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QBF29794
UniProt:
A0A4P6MEF5
LinkDB
All DBs
Position
188688..189539
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVETVRRGLAPVMEGDVIARADVNRPDLRWPFPERMAERLTGQQVLRLRRRSKYI
LADLSGGETLLIHLGMTGRMTASGDPLGQFVHTHPMPEKHDHVVLHMKSGARITFNDARR
FGAMDLMPTEGAEVHKLLAVLGPEPLGNDFHEQHLIDAFRGKNTPVKAALLDQRIVAGLG
NIYVCEALYRARISPRRKAGRIGAARVAALVPIIRQVLADAIEAGGSSLRDYRQADGELG
YFQHSFDVYGREGEPCRTPECSGHVGRIVQSGRSSFYCVQCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccagaggttgagacggtccgtcgcgggctggccccggtgatggagggc
gatgtgatcgcacgggccgacgtgaaccggcccgacctgcgctggcctttcccggagcgg
atggcagagcgtctgaccggccagcaggtgctgcggctgagacggcggtcgaaatatatc
cttgccgatctcagcggaggtgagacgctgcttatccatctgggcatgacgggtcgcatg
acggcgtcgggcgatccgctggggcagttcgtgcatacgcatccgatgccggaaaagcac
gatcatgtggtgctgcatatgaaaagcggcgcgcggatcacctttaacgacgccaggcgg
ttcggagcaatggacctgatgccgaccgaaggtgccgaggtgcataagctgctcgcagtt
ctggggccggagcccttgggcaacgactttcacgaacagcacctgattgatgcctttcgg
ggcaaaaacacgccggtcaaggcggcgcttctggatcagcgcatcgtggcgggcctgggc
aatatctatgtctgcgaggcgctttaccgcgcgcgcatctctccccgccgcaaggccggg
cgcatcggggcggcgcgggtggcggcactggtaccgatcatccgacaggtgctggcggat
gcgatcgaggcgggcgggtcgagcctgcgcgactaccggcaggcggacggggaattgggc
tattttcagcacagtttcgatgtctacggacgcgagggggaaccgtgccgcacgcccgag
tgttcgggtcatgtggggcgaatcgtgcagtcgggacggtcgtcgttctactgcgtgcaa
tgccaaagataa
DBGET
integrated database retrieval system
